Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06005 ATGAGATGGCCGGAAACGGTTGGAAGAAAGAACGATATCGCCGGAAAACGAAAAGAGGGTTTTCTGTTTCCCTTCCGGCACAGACTCCCCAACCTTATTGATTTGAAGTGGAAACGATTTTTTTATTCTTTCTCAAGTATCTGCCACTCTTCCTTTTCTTCTTCTTCTTCTTGGGAGAGATTAGTGGTTAACATTGTGGAAGATTGTCTGGAACTGTTGATACTCAACTTGTGTTGTTTACTGTTGTGGGCGAGTTTGATCCATGGAGTTGGGTTTGGTCTGAAAGTGGGGCATTTATGTTTATTGCTATGTTCCTGGCTTGTGTCTGTGTTCTACCTCACGTGGTTCAATAGCAGTGGAAGATTGAAGAGCAAGATCTCAGGGAACGGGTTCAAGGTTCAGCAACACAAGTACCAAAGTATTGGATCCATGAAACTGAAGAGTGGTTGGGTGAGAAGGGCTTTTTATTCATGGATTCTAGTTTGTACGTTGGGAGGTTTGTACGGGTTCTGGCGCATGAGCATACATGCTTGTGAGCAGAGGAAAGAAAGTCTAATAAGCATGTGTGATGAAAGAGCAAGGATGCTGCAGGATCAGTTCAATGTGAGCATGAACCATATACAAGCCATGTCCATTTTGATAAAAACCTTCCACCATAACATGAACCCCTCGGCCATCGATCAGAGCACTTTTGCTAGATACACTGAAAGAACTTCGTTTGAGAGGCCCCTCACAAGTGGTGTTGCATACGCTGTAAGAGTGCTCCATTCTCAAAGGGAACAGTTTGAGAAGCAACAAGGATGGACTATCAAGAAGATGGATACTTTGCAACAATCCCTTGTTCAAGAAGAATATGCTCCTGTCATCTTTGCACAAGATACAATTGCACATGTCATTTCTCTTGATGTGCTATCTGGAAAGGCAAACCGTGAGAATGTGCTCCGAGCAAGGGAGTCAGGCAAAGGAGTTTTAACTGCACCCTTTCGGCTTCTCAAAACGAATCGCCTTGGGGTAATCCTCACATTTGCTGTCTACAAGAGAAATCTTCCATCCAATGCAACCCTTGATCAGAGGATTCAAGCAACTGATGGATATCTTGGTGGAGTCTTTGATGTTGAGTCGTTAGTGGAGAAACTACTGCAACAACTTGCTAGTGAGAAAGCTGTAGTTGTTAATGTGTATGATACTACCAATAGTACACATCCCATTGTCATGTACGGTTCAAATATATCAGGGGACTCTTTCTCTCATGTCAGCACTCTTAACTTTGGAGACCCTCTCAGGAAGCATGAGATGCACTGCAGGTTCAAACAAAAACTGCCATGGCCATGGTTGGCATTTAACACTTCTGTAGGAGGCTTTATTATTTGTGTCCTTCTTGGGTATATTTTCTATGCCACCTGCAATCGAGTTGTCAAAGCGGAAGAGGATCGGGATAAGATGACTGAGCTTAAAAAGCGAGCTGAGGCGGCTGATATTGCAAAATCCCAGTTTCTTGCTACTGTGTCCCACGAGATTAGAACACCAATGAATGGGGTTTTAGGGATGTTGCATATGCTTATGGACACGGATCTAGACGTAACCCAACAAGAGTACGTGAGAACGGCGCAGGGAAGTGGAAAAGCTTTGGTGTCACTGATAAACGAGGTATTGGATCAGGCAAAGATTGAAGCTGGTAAGCTGGAGCTTGAAGCTTCGCTGTTTGACTTGCGTGCTGTTTTGGATGATATATTATCATTATTTTCAGAAAAGTCTCAAGGAAAAGGAATAGAGTTGGCAGCTTATGTATCAGATGAGGTTCCTGAGCTGTTAATAGGTGATGCAGGAAGGTTTAGACAAATAATTACCAATCTCATGGGTAATTCAATTAAGTTCACAGAGAAAGGGCATATTTATGTGACTGTCCATCTTGTTGAGGAGGTGGTCCATTCAATACAGATTGATAAAGAATTAGGCATGGAAAATGTGAATACCCTGAGTCTGAGTGGTTTCCCTGTTGCTGATAGTCGCCGAAGCTGGGAAGGCTTCAAAGCATTCAGTCAAGTAGGGCCTCTTGGTTCTTTCTCATCCTCTGTTACTGATGTAATCAATTTGATTGTATCGGTTGAGGACACCGGCGAAGGAATCCCTCTGGAAGCGCAGTCTCGAATCTTCACTCCGTTCATGCAGGTTGGGCCTTCCGTTTCCCGGAGACACGGTGGAACAGGTATTGGCCTAAGCATTAGCAAGTGTTTGGTTGGTCTCATGAATGGCGAAATTGGATTTGTCAGCATACCTAAGATTGGATCCACCTTCACTTTTACTGCTCTCTTCACCAATTCAACTGACTGCAAAATTCAGCAACTCAACAACAACAACAGCCACTCTAATCCTCCATCTTCAGAATTTCAGGGAATGACCGCGTTAATCATTGACCCTAGATCGGTNNNAGGTTTATCCACCATAACTGAAGGCAATCAGATTATCAATATGGTACTTATTGAGCAGGAAGTGTGGGATAGAGATTCAGCCATGTCATCTCGATTTGTCGATGGCGCCAGTAGAGTAGGCGTTCCTCCTAAGTTGTTCATTCTTGTTAATTCTAATGGCTGGACATCAGGTATTGGTAATCCCACTGTGATCGTAAAACCTCTGAGAGCAAGTATGCTTGCTGCCTCGCTGCAGCGAGCCATGGGTGTTACTTGCCGAAATGGGGAGCTTCCGAGTTTATCTGTTGGCCACCTTCTTGGCGGGAAGAAAATTCTAATTGTAGATGACAATGTTGTGAACCGCACCGTAGCAGCTGGTGCTTTGAAAAAGTATGGAGCAGATGTGGTGTGTGTTAGCAGCGGAAAAGAGGCCATCTCTAAACTAAAACCACCCCATGAGTTCGATGCGTGCTTCATGGATATTCAAATGCCAGAAATGGACGGTTTTGAAGCTACAAAGAAAATCAGGGAGATGGAACGTTGCGCCAAGAGAGAAGGTTTTGTAGATAACTTATCAAAGTGGGATGTCCCTATTTTGGCCATGACTGCAGACGTGATCCAGGCTACCCATGAGGAGTGTGTAAGGTGTGGCATGGTTGGATATGTTTCTAAACCGTTTGAAGCCGAACAGCTTTATCGAGAAGTCTCAAGGTTTTTCCACTCCTGA 3135 0.4396 MRWPETVGRKNDIAGKRKEGFLFPFRHRLPNLIDLKWKRFFYSFSSICHSSFSSSSSWERLVVNIVEDCLELLILNLCCLLLWASLIHGVGFGLKVGHLCLLLCSWLVSVFYLTWFNSSGRLKSKISGNGFKVQQHKYQSIGSMKLKSGWVRRAFYSWILVCTLGGLYGFWRMSIHACEQRKESLISMCDERARMLQDQFNVSMNHIQAMSILIKTFHHNMNPSAIDQSTFARYTERTSFERPLTSGVAYAVRVLHSQREQFEKQQGWTIKKMDTLQQSLVQEEYAPVIFAQDTIAHVISLDVLSGKANRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKRNLPSNATLDQRIQATDGYLGGVFDVESLVEKLLQQLASEKAVVVNVYDTTNSTHPIVMYGSNISGDSFSHVSTLNFGDPLRKHEMHCRFKQKLPWPWLAFNTSVGGFIICVLLGYIFYATCNRVVKAEEDRDKMTELKKRAEAADIAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEYVRTAQGSGKALVSLINEVLDQAKIEAGKLELEASLFDLRAVLDDILSLFSEKSQGKGIELAAYVSDEVPELLIGDAGRFRQIITNLMGNSIKFTEKGHIYVTVHLVEEVVHSIQIDKELGMENVNTLSLSGFPVADSRRSWEGFKAFSQVGPLGSFSSSVTDVINLIVSVEDTGEGIPLEAQSRIFTPFMQVGPSVSRRHGGTGIGLSISKCLVGLMNGEIGFVSIPKIGSTFTFTALFTNSTDCKIQQLNNNNSHSNPPSSEFQGMTALIIDPRSVXXGLSTITEGNQIINMVLIEQEVWDRDSAMSSRFVDGASRVGVPPKLFILVNSNGWTSGIGNPTVIVKPLRASMLAASLQRAMGVTCRNGELPSLSVGHLLGGKKILIVDDNVVNRTVAAGALKKYGADVVCVSSGKEAISKLKPPHEFDACFMDIQMPEMDGFEATKKIREMERCAKREGFVDNLSKWDVPILAMTADVIQATHEECVRCGMVGYVSKPFEAEQLYREVSRFFHS 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06005 1045 Gene3D CHASE domain 226 440 IPR042240 -
Arst3g06005 1045 CDD REC_hyHK_CKI1_RcsC-like 915 1039 - -
Arst3g06005 1045 Pfam CHASE domain 225 406 IPR006189 -
Arst3g06005 1045 ProSiteProfiles CHASE domain profile. 222 433 IPR006189 -
Arst3g06005 1045 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 548 768 IPR036890 -
Arst3g06005 1045 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 482 560 IPR036097 GO:0000155|GO:0007165
Arst3g06005 1045 PANTHER TWO-COMPONENT HISTIDINE KINASE 66 1036 - -
Arst3g06005 1045 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 606 771 IPR003594 -
Arst3g06005 1045 Gene3D - 558 775 IPR036890 -
Arst3g06005 1045 Pfam Response regulator receiver domain 915 1038 IPR001789 GO:0000160
Arst3g06005 1045 Gene3D - 467 557 - -
Arst3g06005 1045 Pfam His Kinase A (phospho-acceptor) domain 494 559 IPR003661 GO:0000155|GO:0007165
Arst3g06005 1045 CDD HisKA 494 555 IPR003661 GO:0000155|GO:0007165
Arst3g06005 1045 FunFam Histidine kinase 4 466 557 - -
Arst3g06005 1045 ProSiteProfiles Response regulatory domain profile. 914 1043 IPR001789 GO:0000160
Arst3g06005 1045 CDD HATPase_EvgS-ArcB-TorS-like 611 771 - -
Arst3g06005 1045 Coils Coil 471 494 - -
Arst3g06005 1045 SMART REC_2 913 1039 IPR001789 GO:0000160
Arst3g06005 1045 SUPERFAMILY CheY-like 911 1042 IPR011006 -
Arst3g06005 1045 SMART HisKA_10 494 559 IPR003661 GO:0000155|GO:0007165
Arst3g06005 1045 FunFam Histidine kinase 4 226 440 - -
Arst3g06005 1045 CDD PRTases_typeI 869 942 IPR000836 -
Arst3g06005 1045 SMART HKATPase_4 606 773 IPR003594 -
Arst3g06005 1045 Gene3D - 909 1045 - -
Arst3g06005 1045 Gene3D - 173 225 - -
Arst3g06005 1045 ProSiteProfiles Histidine kinase domain profile. 501 773 IPR005467 -
Arst3g06005 1045 SMART CHASE_2 222 408 IPR006189 -
Arst3g06005 1045 PRINTS Bacterial sensor protein C-terminal signature 716 726 IPR004358 GO:0016310|GO:0016772
Arst3g06005 1045 PRINTS Bacterial sensor protein C-terminal signature 698 712 IPR004358 GO:0016310|GO:0016772
Arst3g06005 1045 PRINTS Bacterial sensor protein C-terminal signature 733 751 IPR004358 GO:0016310|GO:0016772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06005 Arst-Chr3 133580143 133593369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06005 85 1045 Miscellaneous Gene Families AT1G27320 61.605 0.0 1233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst3g06005 CHASE 5.7e-37 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06005 K14489 - gmx:100776798 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g06005 3 133580143 133593369 Arst3g06005 3 133580143 133593369 ECH