Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05983 ATGTGCAAGGCGCTTTCTCTGATATATTGCAAAATATTGTCGGTATTTCCTTCCTTGGAAGCAGCTCGGCCTAGGAGCAAATCTGGAATTCAAGCATTATGTTCTCTGCACATGGCCATAGAGAAGACTAAAAACATTCTTCAGCACTGCACAGAATGTAGTAAACTTTACCTGGCTATTACTGCAGATTCTATTCTTCTAAAATTTGAGAGGGCTAAATGTTCTCTCAAAGATGGTCTTAAACGGGTGGAAGATATTGTTCCACAATCTATTGGGTGTCAGATTCAGGAGATTGTCAATGAACTTGCAAGTGTGTCATTTGCACTTGATCCATCAGAGAAGAAAATTGGTGATGATTTAATTGCATTGCTTCAGCAGGGAAGAAAGTTTAATGACTCTAATGACAGCAATGAACTTGAATCTTTTCATCAGGCTGCTAGCAGGCTTGGAATTACATCTTCTAGAGCAGCTCTTGCTGAAAGAAGAGCTCTCAAGAAGGTCATAGAAAGGGCTCGGGCAGAGGAAGACAAGCGGAAGGAATCAATTGTTGCTTATCTTTTGCATCTTATGAAGAAATACTCAAAATTATTTAGAAATGAGTTCTCAGATGACAATGATTCTCAGGGTTCTGCACCTTGTTCTCCCACTGTTCAGGGATCCATTGAGGATGGTGTTCCCGGTGTTCATTGTCAGGCCTTTGACAGACAGTTTTCTAAACTTGGTTCCTTTTGTTTTAAGCCAAATGATATGAAATCAGAGCACATGCCCCTTCCCCCTGAAGAGCTAAGGTGCCCAATATCTTTGCAACTTATGTACGATCCTGTAATCATTGCTTCTGGGCAAACTTACGAAAGGTTATGTATAGAAAAATGGTTTAGTGATGGCCACAGCACTTGCCCAAAGACCCAACAGAAGCTCACACATCTCTGTTTGACTCCTAATTACTGTGTGAAAGGTCTTGTTGCTAGTTGGTGTGAACAGAATGGAGTTAATATTCCCGAAGGCCCTCCTGAATCTCTTGATCTTAATTACTGGAGATTGGCATTCAATGAGTCTGAATCCACAAATTCAAGATCTGCAAACAGTGTCAGCTCTTGCAAGTTGAAGGGTATTAAAGTGGTTCCATTAGAAGAAAGGGGTACCTTTGAGGAAATTGGGGGAAATAGGGCTGAAAGTTTGTCTACACAAGAGGAAGATATTGCGCAGTACTCAAGCCTTCTGGAAATCTTGACTGAGGCTAATAGTTTGAAGAGGAAATGTAAAGTGGTTGAACGATTAAGGCTGCTGCTGAAGGATGATGAAGAAGCAAGGATTTTTATGGGGGCTAATGGCTTCGTTGAAGTACTTTTGCGGTTTTTACAATCAGCTGTGCGTGAAGGAAATTTGATGGCTCAGGAGCATGGAGCAATGGCTCTTTTCAACCTGGCTGTAAATAATGACAGAAATAAGGAAATCATGTTGGCGGCAGGAGTATTATCATTGTTGGAGGAAATGGTTTCAAATACTCCTTCGTATGGTTGTGCAACTGCCTTATACGTGAATCTATCTTCCCTTGAAGAGGCCAAGCGTTTGATTGGTATGAGTCAGGCTGTTCAGTTCTTAATCGAGCTTCTTCAAGCTGACACTGATATTCAATGCAAGCAGGATTCTCTCCATGCTCTCTATAATCTTTCCACTGTAACTTCCAACATTCCTTACCTCCTTTCATCCGGCATCGTTGGCGGCCTACAAATTCTTCTTGTGGACCAGGGCGATTGTAGTTGGATAGAAAAATGTATAGCTATTTTGATAAATTTGGCTTCTTCCCAAGATGGGATGGAGGAAATTTTATCGACTCCAGGAATTATAGGCGCATTGGCTTCAATATTGGACACAGGCGAGCTCCTAGAGCAGGAGCAAGCTGTCTCTTGCCTCCTGCTTCTATGCAATAGAAGTGAGAAATGTTGTGAGATGGTGCTACAAGAAGGTGTCATCCCTGCATTGGTTTCAATATCAGTGAATGGAAATCCAAGAGGGAGAGATAAAGCTCAGAAACTCCTGATGCTGTTTCGAGAGCAGCGGCAACGAGACCATCCGCCAGTGCAAGCTGACGCACATCATTGCCCTCCTGAAACTAACGATTTGTCAATGCCGCCTTCTGAAATGAAGCCGCAATGCAAGTCAATGTCTAGAAGTAAGACAGGGAAAGCTTTTAGCTTTTTCTGGAAAAGCAAGAGCTTTTCTGTCTACCAGTGTTAA 2238 0.4218 MCKALSLIYCKILSVFPSLEAARPRSKSGIQALCSLHMAIEKTKNILQHCTECSKLYLAITADSILLKFERAKCSLKDGLKRVEDIVPQSIGCQIQEIVNELASVSFALDPSEKKIGDDLIALLQQGRKFNDSNDSNELESFHQAASRLGITSSRAALAERRALKKVIERARAEEDKRKESIVAYLLHLMKKYSKLFRNEFSDDNDSQGSAPCSPTVQGSIEDGVPGVHCQAFDRQFSKLGSFCFKPNDMKSEHMPLPPEELRCPISLQLMYDPVIIASGQTYERLCIEKWFSDGHSTCPKTQQKLTHLCLTPNYCVKGLVASWCEQNGVNIPEGPPESLDLNYWRLAFNESESTNSRSANSVSSCKLKGIKVVPLEERGTFEEIGGNRAESLSTQEEDIAQYSSLLEILTEANSLKRKCKVVERLRLLLKDDEEARIFMGANGFVEVLLRFLQSAVREGNLMAQEHGAMALFNLAVNNDRNKEIMLAAGVLSLLEEMVSNTPSYGCATALYVNLSSLEEAKRLIGMSQAVQFLIELLQADTDIQCKQDSLHALYNLSTVTSNIPYLLSSGIVGGLQILLVDQGDCSWIEKCIAILINLASSQDGMEEILSTPGIIGALASILDTGELLEQEQAVSCLLLLCNRSEKCCEMVLQEGVIPALVSISVNGNPRGRDKAQKLLMLFREQRQRDHPPVQADAHHCPPETNDLSMPPSEMKPQCKSMSRSKTGKAFSFFWKSKSFSVYQC 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05983 745 MobiDBLite consensus disorder prediction 691 721 - -
Arst3g05983 745 Gene3D - 381 691 IPR011989 -
Arst3g05983 745 SUPERFAMILY RING/U-box 252 333 - -
Arst3g05983 745 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 332 IPR013083 -
Arst3g05983 745 SMART arm_5 518 559 IPR000225 GO:0005515
Arst3g05983 745 SMART arm_5 433 477 IPR000225 GO:0005515
Arst3g05983 745 CDD RING-Ubox_PUB 259 311 IPR045210 -
Arst3g05983 745 ProSiteProfiles U-box domain profile. 257 331 IPR003613 GO:0004842|GO:0016567
Arst3g05983 745 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 444 490 IPR000225 GO:0005515
Arst3g05983 745 PANTHER U BOX DOMAIN-CONTAINING 7 687 - -
Arst3g05983 745 SMART Ubox_2 261 324 IPR003613 GO:0004842|GO:0016567
Arst3g05983 745 FunFam RING-type E3 ubiquitin transferase 257 331 - -
Arst3g05983 745 Coils Coil 154 174 - -
Arst3g05983 745 SUPERFAMILY ARM repeat 405 683 IPR016024 -
Arst3g05983 745 Pfam U-box domain 259 328 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05983 Arst-Chr3 133345444 133348967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05983 1 744 U-box Gene Family AT1G24330 64.822 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05983 - - gmx:100794099 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05983 3 133345444 133348967 Arst3g05983 3 133345444 133348967 ECH