Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05961 ATGGCCATTGTGGATACTCTGCTTGTAACAGCCAATGTGGCATTCTTCTATGCAATTCTGATATGGCTGCTTCTTCACACTTTGAGACAAAGCAAGCTTCAACGTGCTGTGTTTCTCCAACAAGGACCAAAATTCTTCTCCATTATCACTCTCCTATTCAATTTCATTCTTACCCTTTTAACTATAGCTTTTGCAGTTCATGAATATAGGACTAATAAAATAGTGAGATATAGTTCTGTTACATTTGCTCTAACATGGGTTATGGCAAGCTTGGTTTCATTCTATTCAATGAAGAAGACAACAAGAGATAACAAAAGATTCCCTTTTGTTCTGGTTCTCTGGTGGGTCTGGGCCAGTATCATAGAGGCAATCTCAGTTTCTATTGGACTAATGAAGAACAACTTTGAATACTTGGACTTCTGGAATTTCTTGTCAGAGGATGATAACATAGTTGGTGTGGTTTCCTTGCCTATGTTGTTGTTGCTTTTGTGTTTGAGTTTTTGTGCAAGAGAAGAACAACACAACACTGACATGGAACAGCTCTTGGTTCACCCTGGAGAAGAAGAAGAAGAAGATGATGATGATGAAGATGGAGAGAACTTCACAACTGCAGGCATTTGGAGCCAACTCACATTTCGATGGCTGAATCCCATTTTTAGAAAGGGTCGAGTTCAGAAGCTTGAGCTTGCTCACATTCCTGATGTTCCTCATTCTGAAACTGCAGAAAATGCTTCTTCCTTATTGGAAGAATCGCTTCGCAAACAGAAACTTGAAGGGGCTTCCTTGGCTAAAGCTATAACCAGTTCTGTGTGGAAGTCCTTGGCTTTAAATGCAGTTTTTGCCGGGGTTAATACAATTGCATCTTATATGGGTCCATTGTTGATTACATACTTTGTCAATTTCTTGGTGGATGATAATTCCAATTCAAGCATCCAATGCGGCCTCATTCTTGCATTCATATTCTTCCTCTCAAAGACATTGGAGTCACTGAGCCAAAGACAATGGTACTTTGGTGCTCAGAGAATTGGAATTCGAGTGCGCGCGGCTCTTATGACTCTAATGTACAGCAAGTCTTTAATGATCAAGTGTGCAGGGCCAACCCATGGAAAAATCATAAACTTGGTGAATGTGGATGTTGAAAGAATTGGGGATTTCTGCTGGTACATTCATGGAGTTTGGTTGCTTCCAGTTCAGGTTATTTTGGCCTTAGTGATATTGTACATAAACTTGGGATTCTTGCCTTCAATTTCTGCACTTGCTGTCACCATTTTGGTTATGGTGTGTAACACACCTTTGGCCAATATGCAAGAAAAGTTACACTCCAAGATCATGGAAGCTAAGGATACAAGAATCAAGATGACTTCAGAGACAATGAAGAACATAAGGATACTGAAATTGCATTCATGGGAATCTACATTCTTACAGAAACTCCTCCAATTGAGAGACACTGAGAAGAGTTGGCTGCAGAAGTACCTCTACACTTGCTCAGCAGTAGCAACTCTTTTCTGGACTTCTCCAACTTTGGTTTCTGTTGTTACTTTCGGCATCTGCATACTGGTGAACACAGAACTGACTGCGGCTACTGTCCTCTCGGCCTTGGCAACTTTTCGGATTCTGCAGGAACCAATCTACAATCTTCCTGAGCTGATTTCCATGATAGCTCAAACAAAAGTCTCTCTTGATCGAATCCAAGAGTTGATCAATGAAGAGGATCAGAACCAGTTTATGAACAAGCACTCTTCGAAAGATTCATCAATTGTTATTGAAATCAAGCCAAGTGAATATGCATGGGAAACAAGTGATGGAACCAACAAGAAACCAACAATTCAAATCACAGAAAACTTGAAGATAAAGAAAGGTCAGAAGGTAGCAGTTTGTGGTTCAGTGGGGTCTGGAAAATCAAGCTTACTTTGTTGTATGCTTGGTGAGATTCCATTGGTTTCCGGGACTTTGATCAAAGTCTATGGAACAAGAAGTTATGTGCCACAGAGTCCCTGGATTCAATCAGGAACAGTAAGAGAAAATATCCTGTTTGGAAAGGAAATGAACAAGGACTTCTATGAAAGTGTTTTGGATGGCTGTGCTTTGCATCAAGATATCAACATGTGGGGTGATGGAGATTTGAATATTGTGGAGGAGAGGGGCATAAACTTAAGTGGAGGCCAGAAACAACGGATTCAACTCGCAAGAGCTGTTTACAATGATTCAGATATTTACTTCCTTGATGATCCTTTCAGTGCAGTTGATGCTCATACTGGAACTCATTTATTTAAAAAATGCCTTATGCAACTTTTGTCTGAGAAGACAGTTGTTTATGCTACTCATCAACTAGAATTTTTGGAAGCTGCAGATTTAATTCTGGTAATGAAAGATGGAAAAATAGTGGAGTCAGGAAGGTATAAAGAACTCATAGCATGTCCCAACTGTGAATTTGTTCGACAAATGGCTGCTCATGAAGAAACAATAAACCAAATAAATCCATGGCATGAAGAGAACTCTATTAGCTGCAGGCCCCTTCAAAAGAATCAAATTGAAGTTGCTGAAGAGAATCTTCAAGAAAGCATAAGCAATTGGAAGAGAAACAAAGAAGAAGAAGCAGAGACCGGTCGAGTGAAATGGAGTGTTTACTCAACCTTTGTCACATCTGCATATAGAGGATCACTTGTTCCGGTCATTCTTCTCTGCCAGATTCTGTTTCAAGTGATGCAAATGGGAAGCAATTATTGGATTTCTTGGGCTGCAGAACAAACTGGGAGGGTAACCAAAGGGATGCTTATGGGAACATTTGTTCTTCTTTCTGGTGGAAGCTCTATTTTTATACTTGGAAGGACTGTTTTGATGGCAGTGGTGGCTGTTGAGACAGCTCAGCGTCTTTTTCATGGAATGATTACATCTGTTTTCAGAGCACCTGTTTCATTTTTTGATACCACACCATCAAGCAGAATCCTCAGTAGGTCATCAACAGATCAAAGTACAATTGACACAGACATACCATACAGATTAGCAGGGCTAGTGTTTGCACTAATTCAGTTGTTGAGTATTATCATGCTAATGTCGCAGGTCGCGTGGCAAGTCATCCTTGTGTTTCTTGTGGTGTTTGCTATCTCCATATGGTATCAGGCTTATTACATTACTACTGCCAGGGAATTAGCCAGGATGGTAGGGATCAGAAAGGCCCCAATCTTGCATCATTTCTCAGAATCTATTGCTGGGGCCGCCACGATCCGTTGTTTCAATCAAGAACAAATATTCATGACCAAAATCAAGGATCTTGTTGATGAATACTCTAGAGTAGCCTTTCATAATTATGCCACCATGGAATGGTTGTCAGTCCGGATCAATTTTCTCTTCAATCTAGTCTTCTACTTTGTTCTCATCATCTTGGTTACTCTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAATGTACTTCAGGCTTGGGTCATATGGAACCTTTGCAATGTTGAGAACAAGATGATATCTGTTGAGAGAATATTGCAATTCTCTAGCATACCAAGTGAAGCACCACTGATAATCCAAGATTGTAGGCCTGAACCAGAGTGGCCTATGGAAGGGAAAATTGAGCTTCAGAATATTCATATTCAGTATGATCCGGCTGGTCCTATGGTTCTCAAAGGTGTCACTTGCACATTCCCGGGGCGAAAGAAGATCGGAGTAGTAGGGAGGACAGGGAGTGGAAAATCAACTCTGGTGCAAGCCCTTTTTCGAGTGGTGGAGCCTTTGGAAGGAAAGATACTAATAGATGGAGTACATATTTCCAAGATTGGTCTGCAGGATTTAAGATCTAAGCTTGGTATAATTCCTCAAGACCCAACCTTGTTTCTAGGCACTGTTAGGACTAACTTGGATCCTCTAGAACAACATGCGGATAAAGAACTCTGGGAGGTTCTCAAGAAGTGCCATCTTGCTGAAATTGTAAGGCAGGATCCAAGACTTCTTGATGCACCAGTGGCTGAGAATGGAGAAAATTGGAGCGTTGGACAAAGGCAACTCGTTTGTCTTGCTAGGCTGCTATTGAAGAAGAGAAGGATTTTGGTTCTAGATGAGGCAACAGCATCTATTGACACTGCAACTGACAATTTAATTCAAAAGACTATTAGAGAAGAAACTAGTGAATGCACAGTGATTACTGTAGCACATAGAATCCCTACAGTTATTGATAATGACTTGGTTTTGGTCCTTGATGAAGGGACAATTGCAGAGTATGATGAACCAGATCAGTTGCTGCAGAACAATACTTCATCTTTCTCAAAGTTGGTTTCAGAATTTTTGAGGAGATCATCCCCCAAGTAG 4344 0.4081 MAIVDTLLVTANVAFFYAILIWLLLHTLRQSKLQRAVFLQQGPKFFSIITLLFNFILTLLTIAFAVHEYRTNKIVRYSSVTFALTWVMASLVSFYSMKKTTRDNKRFPFVLVLWWVWASIIEAISVSIGLMKNNFEYLDFWNFLSEDDNIVGVVSLPMLLLLLCLSFCAREEQHNTDMEQLLVHPGEEEEEDDDDEDGENFTTAGIWSQLTFRWLNPIFRKGRVQKLELAHIPDVPHSETAENASSLLEESLRKQKLEGASLAKAITSSVWKSLALNAVFAGVNTIASYMGPLLITYFVNFLVDDNSNSSIQCGLILAFIFFLSKTLESLSQRQWYFGAQRIGIRVRAALMTLMYSKSLMIKCAGPTHGKIINLVNVDVERIGDFCWYIHGVWLLPVQVILALVILYINLGFLPSISALAVTILVMVCNTPLANMQEKLHSKIMEAKDTRIKMTSETMKNIRILKLHSWESTFLQKLLQLRDTEKSWLQKYLYTCSAVATLFWTSPTLVSVVTFGICILVNTELTAATVLSALATFRILQEPIYNLPELISMIAQTKVSLDRIQELINEEDQNQFMNKHSSKDSSIVIEIKPSEYAWETSDGTNKKPTIQITENLKIKKGQKVAVCGSVGSGKSSLLCCMLGEIPLVSGTLIKVYGTRSYVPQSPWIQSGTVRENILFGKEMNKDFYESVLDGCALHQDINMWGDGDLNIVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMQLLSEKTVVYATHQLEFLEAADLILVMKDGKIVESGRYKELIACPNCEFVRQMAAHEETINQINPWHEENSISCRPLQKNQIEVAEENLQESISNWKRNKEEEAETGRVKWSVYSTFVTSAYRGSLVPVILLCQILFQVMQMGSNYWISWAAEQTGRVTKGMLMGTFVLLSGGSSIFILGRTVLMAVVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTIDTDIPYRLAGLVFALIQLLSIIMLMSQVAWQVILVFLVVFAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEQIFMTKIKDLVDEYSRVAFHNYATMEWLSVRINFLFNLVFYFVLIILVTLPRSAIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIQDCRPEPEWPMEGKIELQNIHIQYDPAGPMVLKGVTCTFPGRKKIGVVGRTGSGKSTLVQALFRVVEPLEGKILIDGVHISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHADKELWEVLKKCHLAEIVRQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSECTVITVAHRIPTVIDNDLVLVLDEGTIAEYDEPDQLLQNNTSSFSKLVSEFLRRSSPK 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05961 1447 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 202 1438 - -
Arst3g05961 1447 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 202 1438 - -
Arst3g05961 1447 Pfam ABC transporter 614 745 IPR003439 GO:0005524
Arst3g05961 1447 Gene3D - 611 840 IPR027417 -
Arst3g05961 1447 CDD ABC_6TM_ABCC_D1 276 563 IPR044746 GO:0140359
Arst3g05961 1447 Gene3D ABC transporter type 1, transmembrane domain 853 1185 IPR036640 GO:0005524|GO:0016020
Arst3g05961 1447 Gene3D ABC transporter type 1, transmembrane domain 249 573 IPR036640 GO:0005524|GO:0016020
Arst3g05961 1447 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 275 555 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g05961 1447 FunFam ABC transporter C family member 10 258 571 - -
Arst3g05961 1447 Pfam ABC transporter 1221 1369 IPR003439 GO:0005524
Arst3g05961 1447 ProSitePatterns ABC transporters family signature. 718 732 IPR017871 GO:0005524|GO:0016887
Arst3g05961 1447 FunFam Multidrug resistance-associated protein 4 573 833 - -
Arst3g05961 1447 SUPERFAMILY ABC transporter transmembrane region 269 570 IPR036640 GO:0005524|GO:0016020
Arst3g05961 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1196 1430 IPR027417 -
Arst3g05961 1447 SUPERFAMILY ABC transporter transmembrane region 891 1184 IPR036640 GO:0005524|GO:0016020
Arst3g05961 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1204 1438 IPR003439 GO:0005524
Arst3g05961 1447 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 891 1167 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g05961 1447 FunFam ABC transporter C family member 3 1187 1439 - -
Arst3g05961 1447 Gene3D - 1187 1440 IPR027417 -
Arst3g05961 1447 CDD ABCC_MRP_domain2 1202 1422 - -
Arst3g05961 1447 SMART AAA_5 1230 1421 IPR003593 GO:0016887
Arst3g05961 1447 SMART AAA_5 619 793 IPR003593 GO:0016887
Arst3g05961 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 590 816 IPR003439 GO:0005524
Arst3g05961 1447 Pfam ABC transporter transmembrane region 276 542 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g05961 1447 Pfam ABC transporter transmembrane region 893 1131 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g05961 1447 FunFam ABC transporter C family member 5 852 1185 - -
Arst3g05961 1447 CDD ABCC_MRP_domain1 588 793 - -
Arst3g05961 1447 Coils Coil 841 868 - -
Arst3g05961 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 806 IPR027417 -
Arst3g05961 1447 CDD ABC_6TM_ABCC_D2 889 1179 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05961 Arst-Chr3 133231492 133237271 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05961 587 842 Calmodulin-binding Proteins AT2G36910 28.369 1.59e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05961 - - gmx:100809063 2249.94