Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05959 ATGTACTTGTCGGAAAAACCCCGACCCATAGATTTCTATAAGGAAGAAAGCAGCACGCGTGACATGATCATCGAGGTCGTCTCCAACGGCGCGGCGGACCTACCTCCTCCGCCGTCCCACCAGCAGCAGCAGATGATCCTGGGTGACAGCAGCGGCGGCGAAGACCCTGAGGTTGAGATCAAGGCGCCAAAGAAGCGCGCGGAGACGTGGGTCCACGAAGAGACTCGAACCCTGATCGCGCTCCGGCGAGAAATGGACGCCCTTTTCAACACTTCTAAGTCCAACAAGCACTTGTGGGAGCAGATTTCTTCCAAGATGAGGGATAAGGGTTTCGATCGCTCGCCGACCATGTGCACCGACAAGTGGAGGAACCTCTTGAAGGAGTTCAAGAAGGCCAAGCACAATGATGGCGCAGCAGGAGGTGGCGGCGGCGGAGGGAGTGGCTCCGCGAAGATGTCGTATTACAAGGAGATTGAGGAGATTTTGAGGGATAGGAGCAAGTGCGTGCAGTATAAGAGCCCCACTCCTCCACCGCCTCCACCATCTAATCACAAAGTTGAATCTTTCATGCAATTCACTGATAAAGGTATTGAGGATACCAGCATCTCTTTTGGTCCAGTTGAAGCTACTGGAAGACCAACACTCAATCTTGAGAGACGTTTGGATCATGATGGGCATCCCCTTGCCATTACAACAGCTGAGGCTGTCACAGCTAGTGGCGTTCCTCCCTGGAATTGGAGAGAAACTCCTGGAAATGGTGAAGAGGGCCAGTCATGTTGTGGAAGGGTTATATCTGTCAAATGGGGTGATTATACGAGAAGAATAGGTATTGACGGTGCTTCAGAAGCCATCAAGGAGGCCATAAGAGCTGCTTTCCGACTGAGAACTAAACGTGCATTTTGGTTGGAGGATGAGGACCAGATAATCAGAAGTCTTGACCGTGACATGCCTTTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTGTGTCTTTATGACGAGTCTGACCATATCCCTGTGCATACTGAAGAGAAGATCTTCTATACAGAAGATGATTATCGTGATTTTTTGACTCGCCGAGGTTGGACATCTCTAAGAGAATTTGACGGCTATAGGAATATTGATAACATGGATGATCTTCGACCCGGGGCCATATACAGGGGTGTGACTTGA 1185 0.4979 MYLSEKPRPIDFYKEESSTRDMIIEVVSNGAADLPPPPSHQQQQMILGDSSGGEDPEVEIKAPKKRAETWVHEETRTLIALRREMDALFNTSKSNKHLWEQISSKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHNDGAAGGGGGGGSGSAKMSYYKEIEEILRDRSKCVQYKSPTPPPPPPSNHKVESFMQFTDKGIEDTSISFGPVEATGRPTLNLERRLDHDGHPLAITTAEAVTASGVPPWNWRETPGNGEEGQSCCGRVISVKWGDYTRRIGIDGASEAIKEAIRAAFRLRTKRAFWLEDEDQIIRSLDRDMPLGNYTLHLDEGMAIKVCLYDESDHIPVHTEEKIFYTEDDYRDFLTRRGWTSLREFDGYRNIDNMDDLRPGAIYRGVT 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05959 394 CDD GT1 68 133 - -
Arst3g05959 394 MobiDBLite consensus disorder prediction 35 49 - -
Arst3g05959 394 Gene3D - 70 132 - -
Arst3g05959 394 SMART sant 66 128 IPR001005 -
Arst3g05959 394 SUPERFAMILY Homeodomain-like 66 127 IPR009057 -
Arst3g05959 394 PANTHER FI21293P1 45 392 - -
Arst3g05959 394 FunFam trihelix transcription factor GT-1 70 132 - -
Arst3g05959 394 ProSiteProfiles Myb-like domain profile. 62 126 IPR001005 -
Arst3g05959 394 Pfam Myb/SANT-like DNA-binding domain 69 161 IPR044822 -
Arst3g05959 394 MobiDBLite consensus disorder prediction 30 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05959 Arst-Chr3 133201036 133204618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05959 22 393 Trihelix Transcription Factor Family AT3G25990 70.509 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Arst3g05959 Myb_DNA-bind_4 2.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05959 - - ccaj:109807736 660.988