Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05950 ATGGAAATGGAAGTGATATCAAGAGAAAGCATCAAACCATGTTCCCCCACTCCAACACACCTCAGAAACTACCCTCTCTCCTTGTTCGACAATGCCGTTTCTCCAAACTCAGTCCCATTAATTTACTTTTATGCCCCTCAAGAATCTCCCGACGAAGCCTCCAAACTATCGCTTCTCAAGAAATCCCTATCCCAAGCTCTATGCAAATACTACCCTTTCGCCGGCAGGTTCAAAGATCCAACCTCCGTACACTGCAACGATGAAGGCGTCTCCCTTGTGGTCACCAGAATTAAAACCAAGAATCTCTCCAACATTCTCCGCAACCCAACGGACGCCCTCTTGAGCCCCTTGTTCCCCGACGAGCTGCAGTGGAAGGATATGGGCTTGGACTCGAGCTTGTTGGCAGTTCAAATTAACTGTTTCGCGTGCGGCGGAATGGCCATAACCGTATGCATGTGTCACAAGGTTGGTGACGCTTCCACTTTGTTCAACTTCTTCAACGATTGGTCAACGCTCACCCAACAACCTCACATCACAGTAGCCTTACCCCATCTTGGAGCTTCGCTTTTCCCACAAACCCACTTCCCACTTCCCCGCCAATATTCCTTCGTCCCTCACCACAACATGGTGTGTAGAAGGCTTGTGTTCGAAGGTTCCAAAATTGATTCCCTTAAGGCCTTGGTTTCGTCGTCGTCGTCTTCTCAGAAGGTGGAGAACCCTACTAGGTTTGAGGTTGTGGTTGCACTGATTTACAAGTGTGCTGTTTCGGCGTTGGGATTGAGTGTTAGCAACACGCTCTTGCGTGTTGCCATCAACTTCCGCAAGAGAATGATTCCTCCGCTGCCGGACAAGTCCTTAGGGAACTTGGTTTCGAGCTTCTATGCTTCCTCCATGGACAATGATGAAGCGGAGTTGCACGAGTTGGTGACCAAAACAAGAGAAGGGCTAGCTTTGTTTTGTGACAAGTATGTAAGAAACTTTGGGGACTTGAAATTCGTGTCGGAGTTCCTAAGATTTGGACAAGCTGTTACTACTGATAATAAGAGTAGTTGTGAGGATGGGGAGAAGAAGAAGAAGAAGAAGAAAGATATGATTTTTTTCTCTGGGTGGTGTAGGTTTTCGGCGTATGAAGCGGATTTTGGGTGGGGGAGGCCAGTGTGGGTGACCACTGTTTTGTGTCCTGTGAAGAACAGCGTGGTTTTGATGGATACAAGAGATGGAAAAGGGATTGAAGCGGTTGTGTGCATGCTTGACAAAGACATGGCCATGTTTGAGCGTCACGTTCATCTTCTTCGCTATGCTTCTCTTGAACCAAACCGTTGGACATGCTCATCATGTTCTTGA 1344 0.4769 MEMEVISRESIKPCSPTPTHLRNYPLSLFDNAVSPNSVPLIYFYAPQESPDEASKLSLLKKSLSQALCKYYPFAGRFKDPTSVHCNDEGVSLVVTRIKTKNLSNILRNPTDALLSPLFPDELQWKDMGLDSSLLAVQINCFACGGMAITVCMCHKVGDASTLFNFFNDWSTLTQQPHITVALPHLGASLFPQTHFPLPRQYSFVPHHNMVCRRLVFEGSKIDSLKALVSSSSSSQKVENPTRFEVVVALIYKCAVSALGLSVSNTLLRVAINFRKRMIPPLPDKSLGNLVSSFYASSMDNDEAELHELVTKTREGLALFCDKYVRNFGDLKFVSEFLRFGQAVTTDNKSSCEDGEKKKKKKKDMIFFSGWCRFSAYEADFGWGRPVWVTTVLCPVKNSVVLMDTRDGKGIEAVVCMLDKDMAMFERHVHLLRYASLEPNRWTCSSCS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05950 447 PANTHER F21J9.9 4 435 - -
Arst3g05950 447 Gene3D - 1 197 IPR023213 -
Arst3g05950 447 Pfam Transferase family 2 429 - -
Arst3g05950 447 Gene3D - 206 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05950 Arst-Chr3 133090945 133092805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05950 1 426 Monolignol Biosynthesis Gene Families AT5G48930 23.144 2.01e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05950 - - gmx:100806928 444.506