Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05934 ATGAAGCTTTCTTCAGCTGATTTTTGTCCTCCACCCCAGGAAGGAGAAAAGCGCGTTTTGGATTCAGAACTTTGGCATGCATGTGCTGGTCCCCTTGTTTCTTTACCAATTGTTGGAAGCCGAGTTGTGTACTTTCCACAAGGTCACAGTGAACAGGTTGCTGTATCAACCAACAGGGAAGTGGATGCCCAAATTCCTAACTATCCAAGCTTGCCTCCCCAACTTATCTGTCAACTTCATAATGTGACTATGCATGCTGATATTGAGACAGATGAAGTATATGCACAAATGACCTTGCAACCTCTGAATCCTCAAGAGCAAAAGGAGGCATACCTTCCAGCAGAGTTGGGCACTCCAAGTAAACAGCCTACAAACTACTTTTGCAAAACTTTGACAGCCAGTGACACAAGCACGCATGGAGGGTTCTCTGTTCCTCGCCGTGCAGCTGAAAAAGTGTTTCCTCCTTTGGACTTCACCCAACAGCCTCCTGCTCAAGAGTTAATTGCAAGGGATTTGCATGGTAATGAATGGAAATTCAGACATATCTTTCGCGGCCAACCCAAAAGGCATCTATTGACAACGGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATGCTGTGCTGTTTATCTGGAATGAAAAGAATCAATTGCTTCTTGGCATTCGCCGTGCTAATCGGCCACAACCTGTGATGCCTTCCTCAGTTTTGTCTAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACCAATAGTCGATTCACCATTTTCTATAACCCACGTGCTTGCCCATCAGACTTTGTCATACCCTTGGCAAAGTATGTTAAAGCTGTGTATCATACTCGAGTCTCAGTTGGCATGCGCTTCAGAATGCTGTTTGAAACAGAGGAATCTAGTGTGCGGCGATACATGGGCACCATAACTGGTATTAGTGACTTGGATCCTGTTCGATGGCAAAATTCACATTGGCGTTCGGTCAAGGTTGGCTGGGATGAGTCCACTGCTGGAGAGAAGCAACCTCGAGTGTCTCTATGGGAAATTGAGCCCTTAACAACATTTCCTATGTATCCATCTCCGTTCCCTCTTAGGCTTAAAAGACCATGGCCTTCAGGACTGCCTTCTTTCTATGGCATGAAGGAGGATGATTTTGGCATAAATTCTTCACTAATGTGGCTTAGAGATGCTGATAGAGGGCTCCAGTCTCTTAATTTTCAGGGTACCGGTGTCAGTCCTTGGATGCAGCCAAGGCTTGATCCCTCCATGTTGAATTTGCAAACAGATCTGTACCAAGCTATGGCTGCCGCTGCACTTCAGGATATGAGGACTTTAGACCCTACCAAACAGCACCCCACTTCCTTAATTCAGTTTCAGCAACCCCAGAACTTCCCTAACCGGACGGGTGCTTTAATGCAGACACCAATGTTGCAGCCCTCTCAACATCAGCAGGCCTTCCCAAATAATCAAGAAATTCAGCATCCATCTCAATCTCAGGTTCAGATTCAAAATCATCTTCAGCAGCATCTACAGAATCAGCACTTATTCAACAACCAGAGTCATCATCAGCAGCAACTACATCAACAACAGCAGCAGCAGCAACCACAGCTTCAACAGCAGCAGCAACAACAACAAATGGTAGATCATCAGCAGATTCCAAATGTGGTCTCTACAATGTCTCAGTTCGTTTCGACTCCGCAGTCTCAGTCGTTACCCATGCAGGCTATCTCTTCACTATGCCATCAGCAAAGTTTTACTGATTCAAATGGTACTGCTGCTGTTTCTCCGCTACACAGTATCTTGGGGTCATTTCCCCAGGATGAAACATCCCACCTTGTCAACCTTGCTAGAACTTCCTCTTGGGTTCCTGTTCAATCTTCATCTGCATGGCCCTCAAAGCGTGTAGCAGTGGATCCTCTTGTTTCTTCTGAAGCTTCTCAATGTGTTCTGCCTCAGGTGGATCAGTTGGGGCAGGCACATAGCACCATGTCTCAGAATGCTATTTCGTTGCCACCAGTTCCTGGCAGGGAGTACAGTGTAGAAGGGAGCACTGATCCACAAAACCATATTTTGTTTGGTGTGAATATAGAAAACTCTCCTTCGCTACTAATGCATCATGGAATGTCAAGCCTTAAGGGGGTTGGCAGCAACACTCATTCATCAACCGTACCTATTCAATCTTCTAATTACCTGAATACAGTAGGCACTGATTCTTCACTGAATCAAGGAATGACACACAGCAATGGTGAATCGGGCTTCCTTCAGACTCCAGAAGATGGGGGCCGAGGAAACCCGCCAAATAAAAAGACCTTTGTGAAGGTTTATAAATCAGGGACCTTTGGAAGATCATTGGATATAACTAGATTTACCAACTACCATGAGCTGCGCAGCGAGCTTGCTCGTATGTTCGGCCTTGAAGGTGAGTTGGAGGACCCTTTGAGATCAGGCTGGCAGCTTGTAGTTGTGGACCGAGAGAATGACGTTCTTCTCCTCGGTGATGACCCATGGCCGGAATTTGTAAATAGTGTATGGTGCATCAAGATACTTTCCCCTCGGGAGGTGCAGCAAATGGCCAACAATGGCATCTGTGATGACTTACCAGGACATGATGACCCAAGAAATTTAGACTTCTGA 2655 0.4618 MKLSSADFCPPPQEGEKRVLDSELWHACAGPLVSLPIVGSRVVYFPQGHSEQVAVSTNREVDAQIPNYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSDFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLPSFYGMKEDDFGINSSLMWLRDADRGLQSLNFQGTGVSPWMQPRLDPSMLNLQTDLYQAMAAAALQDMRTLDPTKQHPTSLIQFQQPQNFPNRTGALMQTPMLQPSQHQQAFPNNQEIQHPSQSQVQIQNHLQQHLQNQHLFNNQSHHQQQLHQQQQQQQPQLQQQQQQQQMVDHQQIPNVVSTMSQFVSTPQSQSLPMQAISSLCHQQSFTDSNGTAAVSPLHSILGSFPQDETSHLVNLARTSSWVPVQSSSAWPSKRVAVDPLVSSEASQCVLPQVDQLGQAHSTMSQNAISLPPVPGREYSVEGSTDPQNHILFGVNIENSPSLLMHHGMSSLKGVGSNTHSSTVPIQSSNYLNTVGTDSSLNQGMTHSNGESGFLQTPEDGGRGNPPNKKTFVKVYKSGTFGRSLDITRFTNYHELRSELARMFGLEGELEDPLRSGWQLVVVDRENDVLLLGDDPWPEFVNSVWCIKILSPREVQQMANNGICDDLPGHDDPRNLDF 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05934 884 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Arst3g05934 884 Gene3D - 773 865 - -
Arst3g05934 884 SMART B3_2 127 229 IPR003340 GO:0003677
Arst3g05934 884 MobiDBLite consensus disorder prediction 525 555 - -
Arst3g05934 884 MobiDBLite consensus disorder prediction 485 510 - -
Arst3g05934 884 FunFam Auxin response factor 771 865 - -
Arst3g05934 884 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 865 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst3g05934 884 Gene3D - 291 363 - -
Arst3g05934 884 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst3g05934 884 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Arst3g05934 884 SUPERFAMILY CAD & PB1 domains 772 851 - -
Arst3g05934 884 FunFam Auxin response factor 125 229 - -
Arst3g05934 884 Gene3D - 125 228 IPR015300 -
Arst3g05934 884 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Arst3g05934 884 FunFam Auxin response factor 291 363 - -
Arst3g05934 884 Pfam AUX/IAA family 773 865 IPR033389 -
Arst3g05934 884 CDD B3_DNA 126 227 IPR003340 GO:0003677
Arst3g05934 884 ProSiteProfiles PB1 domain profile. 776 860 IPR000270 GO:0005515
Arst3g05934 884 MobiDBLite consensus disorder prediction 751 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05934 Arst-Chr3 132922357 132928278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05934 1 483 B3 DNA Binding Superfamily AT1G30330 84.631 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst3g05934 AUX_IAA 1.5e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05934 - - gmx:100777789 1427.92