Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05930 ATGAATCAAAAGCAGCTTGAGCCACTACCTTTGCTAAGCAGCTTCCTTGGTTCTTCAACATGTTCATCATCAGAACTAAATCAAAATCTGAAAGAAGATGTGACAGTGGCCTTACACATTGGGCTCCCTGACAATTCCCATGATAATCAAAATGTAGAACCTCTCCAAGCTCCAAATAATTACTGGATACCAACAGAAGAGCAGATTATAATTGGTTTCAGCCACTTCTCATGTCCTGTTTGCCCAAAAACCTTCAACCGCTACAACAATCTTCAGATGCATATGTGGGGACATGGGTCAGAATACAGAAGAGGGCCAGAGTCACTGAAAAGAACACATCCAAGGCCATTGTTGGAGATAGCATGCTACTGCTGCAAAGGAGGGTGCAAGAACAACATAGAGCATCCAAGAGCAAAGCCTCTGAAAGATTTCAGAACACTGCAAACACACTATAAGAGGAAGCATGGACCCAAACCCTTCTCATGCCGCAAGTGTGCAAAGAATCTGGCTGTGAAAGGTGACTGGAGAACTCATGAGAAGAACTGTGGCAAACGCTGGCTTTGTCTTTGTGGCTCTGACTTCAAACACAAGAGGTCTCTTAAGGATCATATCAAAGCTTTTGGCTTTGGTCATACTCCCTTCTCCTCTTCTTCTACTTCTTCTTCTCATTAA 672 0.433 MNQKQLEPLPLLSSFLGSSTCSSSELNQNLKEDVTVALHIGLPDNSHDNQNVEPLQAPNNYWIPTEEQIIIGFSHFSCPVCPKTFNRYNNLQMHMWGHGSEYRRGPESLKRTHPRPLLEIACYCCKGGCKNNIEHPRAKPLKDFRTLQTHYKRKHGPKPFSCRKCAKNLAVKGDWRTHEKNCGKRWLCLCGSDFKHKRSLKDHIKAFGFGHTPFSSSSTSSSH 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05930 223 PANTHER ZINC FINGER PROTEIN WIP2 7 216 IPR043584 GO:0003700|GO:0010468
Arst3g05930 223 Gene3D Classic Zinc Finger 75 98 - -
Arst3g05930 223 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Arst3g05930 223 FunFam Zinc finger protein WIP2 129 211 - -
Arst3g05930 223 FunFam zinc finger protein WIP2-like 75 98 - -
Arst3g05930 223 SUPERFAMILY beta-beta-alpha zinc fingers 71 99 IPR036236 -
Arst3g05930 223 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05930 Arst-Chr3 132904686 132905522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05930 1 217 C2H2 Transcription Factor Family AT1G34790 56.917 3.03e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst3g05930 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05930 - - ccaj:109809318 367.081