Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05922 ATGTCAGGTGCTGCTAGGGCGGTTGGAGCGGTTGCTCTACACACTTCAATGTGCACCTTCTCATCCTCCCATTCCCACAGACCATCAACAACTCCTTTCAATTCTCACCAACCTAACACAAACACTCATCTCACTAGCCTCCTCCAAACTCACCCACTTTACCCTCTAACAACTGCAAGGCTCTCTCTTCAATTCAAAGAGAAAATCCTCTGCCTTGAGATCATGGGCGTTGATGCTGGCAAAGCATTGTCCCAGAACCCTGCTCTAACCACAGCTTCAATGGAATCCATTCAATCCATTATCTCCTTCCTTCTTTCCAAAGACATCCAGCACAAGGACATTCCTAGGATCATTTCCATGTGCCCCAAGATTCTCACCTCTGACATTAATGCTCAGCTTGACCCAGTTTTTGACTTTCTCTCACAAGACCTCAAAGTCCCGGATCATAGCTTTAGGAAGGTTATCAATAAGTGTCCATACTTGCTCACCGCCAGTGTTGTAGATCAGCTTAAGCCAACTTTGTTTTATCTTAGAAGATTTGGCTTGAAGGACTTGAAGGCCCTGGCTTATCAAGAACCTGTTTTGTTGGTGTCTAGTGTTGAGAAATCCTTAATCCCTAAGCTGAGATATTTGGAGAGTTTAGGATTCTCTAAGGATGAGGTTAAGGATATGGTCTTGAGATGTCCATCATTGCTCACTTTCAACATTGAAGTTAATTTTCGGCCCAAGTTTGAGTATCTTGTTGGGGAAATGGGGAAGAAACTGAAGGAGCTGAAAGAATTTCCCCAGTACTTTTCTTTTAGTTTGGAGAACAGGATAAAGCCTAGGCACATGGAGGTGTTGCAAAGTGGTATCAATTTGCCTTTGTCACTGATGCTTAAGAGCACTGATCAAGAGTTTAGGGAGCTGATAGAGCAGGGGGTGGGTGACACTCACTGA 939 0.442 MSGAARAVGAVALHTSMCTFSSSHSHRPSTTPFNSHQPNTNTHLTSLLQTHPLYPLTTARLSLQFKEKILCLEIMGVDAGKALSQNPALTTASMESIQSIISFLLSKDIQHKDIPRIISMCPKILTSDINAQLDPVFDFLSQDLKVPDHSFRKVINKCPYLLTASVVDQLKPTLFYLRRFGLKDLKALAYQEPVLLVSSVEKSLIPKLRYLESLGFSKDEVKDMVLRCPSLLTFNIEVNFRPKFEYLVGEMGKKLKELKEFPQYFSFSLENRIKPRHMEVLQSGINLPLSLMLKSTDQEFRELIEQGVGDTH 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05922 312 MobiDBLite consensus disorder prediction 21 42 - -
Arst3g05922 312 Pfam mTERF 152 300 IPR003690 GO:0003690|GO:0006355
Arst3g05922 312 Pfam mTERF 72 184 IPR003690 GO:0003690|GO:0006355
Arst3g05922 312 PANTHER CGI-12 PROTEIN-RELATED 63 302 IPR003690 GO:0003690|GO:0006355
Arst3g05922 312 FunFam Transcription termination factor MTEF1, chloroplastic 140 308 - -
Arst3g05922 312 Gene3D Transcription termination factor 3, mitochondrial 132 306 IPR038538 -
Arst3g05922 312 SMART mt_12 222 254 IPR003690 GO:0003690|GO:0006355
Arst3g05922 312 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Arst3g05922 312 SMART mt_12 80 110 IPR003690 GO:0003690|GO:0006355
Arst3g05922 312 SMART mt_12 255 288 IPR003690 GO:0003690|GO:0006355
Arst3g05922 312 SMART mt_12 152 183 IPR003690 GO:0003690|GO:0006355
Arst3g05922 312 SMART mt_12 115 147 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05922 Arst-Chr3 132882207 132883235 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst3g05922 mTERF 2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05922 K15031 - gmx:100788221 405.986