Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05889 ATGTCTGAGGTTTGGTTATCTCTGAAGAATTCACTTCATTATTGCAAACCTCACTCAACAGAAGTTCATGATCCCATGACAAGTAGAAGGCAGCAACATAGAAAAAAAAAGACACGAGACAAAGTCATAGAAGGTTCAAATTCAGAGAAACAACATAATGGTGGTGATGATGCAATAATCGTTGACCCTGTCACACATGATATTGTCCTTGATGACACGAGCGAGGAATTTAAGATTAAGACTTATCTATCTTATCCTTACACTCACCTCAATAATACTCGCGAAGATGGTGGCAACAAAGGGTTGGAAGAATCATCAAATAGATCAACAAGAAGAGGTATGTCTTTGACGAAAACACAATATGTTGATTGTTACCAATGCAGTGGTTTCTTAAAGTCAAAGGTTTCGATGCACAAAGGTTCTAATAGTGTTCCACTAACATCGACATGTCATCATGATCATCATCATCAATGTCGTGACAAACAAGAAAAATGTGTGGAAGGTTACAGTATCACTGAGAATTCAGTTGTGCAACTTGACAGAGAAGATTCATCTTGGAAGATCATAGAAAGAATTTGCCAAACCAAATATATGAACCCTCAAACTACTGAAACCAATGCAGCAGCACATATAGAATGTGTCTTAAAAGTTCTTACCACTCCACAAACACTCGCTTCCTTTGAGGAATGCAGAGAAACAGTGAGAAACATAGCTGAGAACATGCAACCTCGATGCATAGCTGATGGAAATGAAGTCATGAGGTTTTATGGAACAACCATTGCATGCTCCCTTGGTCTAGTAAATTACTCTTCTACCCTCACCTGCACTTTAGAACAATGTGGTTTGTGCCAAATTCTGAAGCATGGTTTCAACGCAAACCAAGAATTCCATGGTGAACGTGGGATTCTCACCACTGCTACAAGTGATCAAGCCTTTGATTCCATTATTTTATTTGAATACGACGAAGAAGCATTACCAATAGTGAGGAAGTGTGTTATAGTGTGCAGAGTAATTGCTGGAAGAGTTCACAATCCTTTGCAAGAGATTCAGGAAGAGACTGATTCGGGTTTTGATTCATTCATCAAGAAAATAAGCCGTGACTCATCAGATATTGAAGAACTCTTTAAGTTCTCATTAAAGGAGAAAGCCAAAGAATATGAGTCCTTTGATGAGGAGTTTAAACTAAATGGGATTAAGCAAAATTCCAGCATGGTTATTGGGATCTGTTGTTCCCCTCTTGTTTCTGTTGTACTTGTACGCTTTTATTGGGATCCCATACATGATGTGGAAAAACAACCGTGA 1302 0.3848 MSEVWLSLKNSLHYCKPHSTEVHDPMTSRRQQHRKKKTRDKVIEGSNSEKQHNGGDDAIIVDPVTHDIVLDDTSEEFKIKTYLSYPYTHLNNTREDGGNKGLEESSNRSTRRGMSLTKTQYVDCYQCSGFLKSKVSMHKGSNSVPLTSTCHHDHHHQCRDKQEKCVEGYSITENSVVQLDREDSSWKIIERICQTKYMNPQTTETNAAAHIECVLKVLTTPQTLASFEECRETVRNIAENMQPRCIADGNEVMRFYGTTIACSLGLVNYSSTLTCTLEQCGLCQILKHGFNANQEFHGERGILTTATSDQAFDSIILFEYDEEALPIVRKCVIVCRVIAGRVHNPLQEIQEETDSGFDSFIKKISRDSSDIEELFKFSLKEKAKEYESFDEEFKLNGIKQNSSMVIGICCSPLVSVVLVRFYWDPIHDVEKQP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05889 433 SUPERFAMILY ADP-ribosylation 176 357 - -
Arst3g05889 433 MobiDBLite consensus disorder prediction 17 58 - -
Arst3g05889 433 Gene3D - 169 392 - -
Arst3g05889 433 MobiDBLite consensus disorder prediction 90 113 - -
Arst3g05889 433 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 43 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05889 Arst-Chr3 132320088 132326126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05889 4 380 C2H2 Transcription Factor Family AT5G54630 31.498 3.49e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05889 - - aip:107634012 724.931