Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05876 ATGTCGACTAAAGGAATATGCGGATCCAAAGATGAGTTTCAGTTTACTTGCTATTGCCCTGATGGAACTAATCATTCTTTGGATTGTTCTCATCATCATAGTAAATTGAATTGGAAGAAGAAAGTTGCTATAGGAGTTGCTGCTGCTGTGCTTAGTGCAGTTATATTAGGCATTGCCTTTAGTCTCTATTACCGTCGATGGAAGAAGAATTTTCAAGATGTATCATTTATACCATCTCACAGCATGTCTTCTTTTTTAGAAGACACTGAAAAGGGACATCAAAAATACTCTGGACTCCAATTCTTTGCCTATAGAGAACTTCAAGAGGCCACAAACAACTTTGATTCAGACAGAGAACTAGGAGATGGAGGCTTTGGGAAAGTATATTTTGGAAAACTTGGAGACGGCCGTTTTGTTGCTGTGAAAAAGATGTATGAGAACAATTACAGGACAGTAGAGCAATTTATGAATGAAATTGAGATCTTAACAGGCTTGCGCCACCAAAATCTGGTATCATTGTATGGATGTAATTCCAGCCACAGCAGTGAATTAATGCTTGTCTACGAATATGTTTCGAACGGAACAGTTGCAGATCATCTCCACGGGCAGAAAGCGAAATCTGGTGCTCTATGTTGGGATACTCGAATGAACATTGCTATAGACACAGCTAGTGCATTGGTATATCTTCATGCTTCAGACATCATCCATAGAGATGTTAAAACCAATAATATCCTTCTTGATGATCACTTTAGAGCCAAAGTAGCAGATTTTGGACTCTCAAGACTATTTCCAAACCACTTAACTCACATTTCAACAGCGCCACAAGGCACACCTGGTTATGTTGATCCGGAGTACCACGAGTACTACCAGCTGACAGATAGAAGCGATGTATACAGCTTTGGAGTTGTGCTGATTGAGCTAATATCTTCAATGCGTGCAGTTGACATAACAAGGCATAGGCATGAGATCAATTTGTCCAACATGGCCATGAAGAAGATTCAGAGTGGTGCGTTGCATGAGATTGTAGACAAAAGCCTTGGATTCGAATCGGATTTGAGGGTAAGGAAGATGATCAATGGTGTTGCAGAGTTGGCATTTCGGTGCTTGCAGAGTTCTAAGGATATGAGGCCTTCAATGGTACAAGTGTTGGATACTTTGAAGGATATACAAAGTGATGGGAAATATAAAAGCAAACCAGAGGTGATGGATATATCAAAACAAGAAGATAACGATGCAACCCTGCTTAAGAACGAACCACCTCCACCTTCACCTGATTCAAATGGGAAAGTATAG 1293 0.4022 MSTKGICGSKDEFQFTCYCPDGTNHSLDCSHHHSKLNWKKKVAIGVAAAVLSAVILGIAFSLYYRRWKKNFQDVSFIPSHSMSSFLEDTEKGHQKYSGLQFFAYRELQEATNNFDSDRELGDGGFGKVYFGKLGDGRFVAVKKMYENNYRTVEQFMNEIEILTGLRHQNLVSLYGCNSSHSSELMLVYEYVSNGTVADHLHGQKAKSGALCWDTRMNIAIDTASALVYLHASDIIHRDVKTNNILLDDHFRAKVADFGLSRLFPNHLTHISTAPQGTPGYVDPEYHEYYQLTDRSDVYSFGVVLIELISSMRAVDITRHRHEINLSNMAMKKIQSGALHEIVDKSLGFESDLRVRKMINGVAELAFRCLQSSKDMRPSMVQVLDTLKDIQSDGKYKSKPEVMDISKQEDNDATLLKNEPPPPSPDSNGKV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05876 430 Gene3D Phosphorylase Kinase; domain 1 85 190 - -
Arst3g05876 430 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 427 IPR044652 GO:0004672
Arst3g05876 430 FunFam Wall-associated receptor kinase-like 20 191 399 - -
Arst3g05876 430 Gene3D Transferase(Phosphotransferase) domain 1 191 403 - -
Arst3g05876 430 SMART serkin_6 114 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05876 430 MobiDBLite consensus disorder prediction 393 430 - -
Arst3g05876 430 ProSiteProfiles Protein kinase domain profile. 114 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05876 430 MobiDBLite consensus disorder prediction 393 413 - -
Arst3g05876 430 SUPERFAMILY Protein kinase-like (PK-like) 96 386 IPR011009 -
Arst3g05876 430 FunFam receptor-like protein kinase FERONIA 79 190 - -
Arst3g05876 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Arst3g05876 430 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Arst3g05876 430 Pfam Protein kinase domain 115 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05876 Arst-Chr3 132219448 132222062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05876 41 426 Receptor kinase-like Gene Family AT1G25390 55.216 9.25e-144 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst3g05876 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05876 - - ahf:112792504 867.07