Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05874 ATGATGACTCCAAATTTGAACTTGGAACCTGAAAATTACTCAGAAGGCAGCAGCCAAGTAGCTTCGAGCGTATCGCTCCAAGAAACATCCCCTGAACTCAACAAGGAAAGCACCACTGCTTCCTCCTGTCTTACAAATCTTACAAAGGCCGAAGGTGATCCCAGCTCCGTGACCCTTGACTTGACACTCAACTTCAATGCGAGTGACGGCGAGTTAAAGGGTACTAGTGATGCTAGCAGTGAAGTGGGACCAGAAGCTTTTGCTTCAGGATCAGCAACTCCCAGGGTGTTCTCTTGTAATTACTGCAGGAGGAAGTTCTTTAGCTCACAGGCTCTTGGGGGTCACCAGAATGCTCACAAAAGGGAGAGGACAATGGCAAAGCGGGCAATGCGAATGGGCATGTTCACCGAGAGGTATACAAGCTTAGCATCTCTGCCTCTTCATGGTTCACCTTTCCGATCTCTTGGCATTGAAGCTCATTCTGCAATGCACCAAAGACCCATGCCACAATTGAGGGCTCCTGATTTGAGAGCCGGTGCAAAATTTGAGAGAAACCATTTTGGATCACCAATATTCATGGAAGATGAAGATGTTGGGCTATTTTGGCCAGGCAGTTTCCGACAGGTCGGGCAGCAAGCCGGTGTTAACATGGTACATGCTCAAACATCCAATACTAATTATTCTCCTATGCCACCTGCTCAACCAAAAGCATCAACATCTCCGGATCTCACCCTCAAGCTTTAG 744 0.4772 MMTPNLNLEPENYSEGSSQVASSVSLQETSPELNKESTTASSCLTNLTKAEGDPSSVTLDLTLNFNASDGELKGTSDASSEVGPEAFASGSATPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSPFRSLGIEAHSAMHQRPMPQLRAPDLRAGAKFERNHFGSPIFMEDEDVGLFWPGSFRQVGQQAGVNMVHAQTSNTNYSPMPPAQPKASTSPDLTLKL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05874 247 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Arst3g05874 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Arst3g05874 247 MobiDBLite consensus disorder prediction 222 247 - -
Arst3g05874 247 FunFam Zinc finger protein 2 75 143 - -
Arst3g05874 247 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
Arst3g05874 247 Gene3D Classic Zinc Finger 88 143 - -
Arst3g05874 247 MobiDBLite consensus disorder prediction 1 41 - -
Arst3g05874 247 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 17 173 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05874 Arst-Chr3 132186730 132190097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05874 91 247 C2H2 Transcription Factor Family AT1G66140 45.745 2.43e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst3g05874 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05874 - - gmx:100775305 376.326