Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05856 ATGTGCCTATTCTTCCGCTGGTGGCAAAAGAGTTCAAGGGACAGTAGTAACCCCCAAAACTCTACCACGTGCCGCCACTTTACCATCGCCGAGATAAGATCCGCCACCAACAACTTCGACCAAGCCCTAATCATAGGCCGCGGAGGCTTCGGCAATGTTTACAAAGGCAAGTTCCCCAAGCACCGCTCCCCCGTGGCCATCAAGCGCCTCAATCAGGGTTCCAATCAAGGACTCCGCGAGTTCCAAACGGAGATCAAGATGCTGTCCCACCTCCGCCATCCTCACCTCGTCTCCCTCATCGGCTACTGCCAGGACGCCGCCGAGATGATCCTCGTCTACGACTACATGGCGCGTGGAACCCTACGCGAGCACCTCTACGACTTCGACAGCAGCAACAACCAAGAACCCCTCTCGTGGAACAAACGCTTGGAGATATGCCTTGCTGCGGCGCGTGGGCTTCACTTCCTGCACACAGAGAACGTGATCCACCGGGACGTGAAGAGCACGAACATACTGCTGGACGATGATTGGATCGCGAAAGTTGCGGATTTCGGTTTGTCGAAGGACGGGCCGAATGGGTCCCACGTGACAACGGACGTGAAGGGTAGTTTGGGGTATTTGGATCCGGAGTACTACATGAGTCAGTGGTTGAGTCAGAAGTCTGACGTGTACTCGTTCGGGGTGGTTTTGTTGGAGGTGTTGTGTGGGAGGCCAGTGATCAAGCGTAGGATCGAGAATAGGCAGGAGGAGTCCCTTGTGATTTGGGTAAAAAGCTGTTATCAAGATGGCAACGTTGATCTGACGGTGGATCCTGCCTTGAAGGGTACCATTGGGCAAAAGTGTTTGGACAAGTTTGTTGAGGTTGCCTTGAGTTGTTTGAACGATCATGGCAAGGAACGCCCTTTCATGAAGGATGTGATGAAGGGCTTGGAGTGTGCCTTGAGCCTGCACCTCACTGGGGGCAAGAACAACAGCGATGACGTGGCAGTCAGCTTCACCGTCCTTGTGGGCCATGATTATGATGACCATTCTCGCGGAGTAGTCATGACCGACTCTCAGTGTACTATTACTACTACCAGTAGTAATGCCGCAACTACCACTACCACTACCACTACAAGCACCACCACATCCAACGAGGAGGAGAAAGCTTTGGTGCTGCATGGGGTCTTCTCTCACCTTGGTAATCCAACACCTACATACTTATCTGTTTGCACTGATAAATGA 1224 0.5278 MCLFFRWWQKSSRDSSNPQNSTTCRHFTIAEIRSATNNFDQALIIGRGGFGNVYKGKFPKHRSPVAIKRLNQGSNQGLREFQTEIKMLSHLRHPHLVSLIGYCQDAAEMILVYDYMARGTLREHLYDFDSSNNQEPLSWNKRLEICLAAARGLHFLHTENVIHRDVKSTNILLDDDWIAKVADFGLSKDGPNGSHVTTDVKGSLGYLDPEYYMSQWLSQKSDVYSFGVVLLEVLCGRPVIKRRIENRQEESLVIWVKSCYQDGNVDLTVDPALKGTIGQKCLDKFVEVALSCLNDHGKERPFMKDVMKGLECALSLHLTGGKNNSDDVAVSFTVLVGHDYDDHSRGVVMTDSQCTITTTSSNAATTTTTTTTSTTTSNEEEKALVLHGVFSHLGNPTPTYLSVCTDK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05856 407 Gene3D Phosphorylase Kinase; domain 1 5 115 - -
Arst3g05856 407 SMART serkin_6 39 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05856 407 ProSiteProfiles Protein kinase domain profile. 39 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05856 407 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Arst3g05856 407 FunFam Receptor-like protein kinase FERONIA 10 115 - -
Arst3g05856 407 FunFam Receptor-like protein kinase FERONIA 116 330 - -
Arst3g05856 407 Pfam Protein tyrosine and serine/threonine kinase 44 308 IPR001245 GO:0004672|GO:0006468
Arst3g05856 407 SUPERFAMILY Protein kinase-like (PK-like) 22 308 IPR011009 -
Arst3g05856 407 CDD STKc_IRAK 45 311 - -
Arst3g05856 407 Gene3D Transferase(Phosphotransferase) domain 1 116 334 - -
Arst3g05856 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Arst3g05856 407 PANTHER OS07G0166700 PROTEIN 23 317 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05856 Arst-Chr3 132011758 132013261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05856 12 396 Receptor kinase-like Gene Family AT3G51550 48.849 2.04e-116 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Arst3g05856 PK_Tyr_Ser-Thr 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05856 - - adu:107482052 803.512