Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05830 ATGTCTGTGGCTGCTCCAAGTTCCCTTTTGAAGGTGGAGGAGATACAAGGAAGAGGGAGGGGAATGGTTGCATCACAACCTCTTAAAGCCGGCCAAATTGTCCTTAGAGATTCTCCTATCCTGCTCTATTCTGCTTTGCCATTGATCCCGCAGTCTTTATCTTCGTCCTCCTCTACCCTAGCCTCCTCCTTCTGTGATCACTGCTTTAGAACCTTACCATCCTCTTTACAGGGCGATTCTTCATCTTCTGCAGTTTTGTGCCCTTCATGTAGACATTATCGTTTTTGCAGCTCTAATTGTCTCTCAAAGGCATTGAATTCATCTCATTCTTCTTGGGTATGTCAAGCATTGTCTCACTTCCAAGCCAACTCTCCTCTTCTTGGACATCCCCTTGAGCTTCAAGTCCAGGCTCAATTTCTCGTTGCTGCATACAATCTTGCCAATATCTCCCCCTCAGACTTTCAAATCTTGCTTTCTCTTCATGGTTCTCCTGATGACGCTACAATTTCTGCAGCTCAATTCCTACACCCTCTTATTTCATCCCTCTGCTCAATTGCTCCCATTGGTCTTCAGAATGTATTTTCTTTGGAACTCACCTCTGCGCTTCTGGCCAAGGACAAGCACAATGCCTTTGGCTTAATGCAGCCTGTTTCTGTTAATGATGGCCAGAGGTCTGTTAGAGCTTATGGTATATACCCCTATGCCTCCTTTTTTAACCACGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATAGTAATCCACCAGATGGCAGTAATAATACTGACATTATTGTTAGGATGATTCATGATGTTCCCCAAGGCAGGGAGATCTGTTTGAGCTATTTCCCTGTCAATGAAAACTATGCTAGCAGGCAGAAGAGATTGATGGAAGACTATGGCTTCACCTGTAATTGTGATCGGTGTAATGTCGAATCAAATTGGTCAGATAATGATGACACTATCGAAGAAGATAATGCAGAGGATGGAGAAGAGGTTATGGATGAGGAGGACCAATATGAAAACATGGCAGCGTCAGATACAGACAATAATAATGATTTCCCACACGCATATTTCTTTTTAAGGTACATGTGTGATAGACCAAATTGCGGGGGAACTTTGGCTCCTCTACCCCCACAAGTTGATAGTCCATCTAATGTCATGGAATGTAATGTCTGTGGCAAATTGAAAAGTGATGATGAGCAAGATGAAGCTCCCATGGAGGACTGA 1233 0.4363 MSVAAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLRDSPILLYSALPLIPQSLSSSSSTLASSFCDHCFRTLPSSLQGDSSSSAVLCPSCRHYRFCSSNCLSKALNSSHSSWVCQALSHFQANSPLLGHPLELQVQAQFLVAAYNLANISPSDFQILLSLHGSPDDATISAAQFLHPLISSLCSIAPIGLQNVFSLELTSALLAKDKHNAFGLMQPVSVNDGQRSVRAYGIYPYASFFNHDCLPNACRFDYVDSNPPDGSNNTDIIVRMIHDVPQGREICLSYFPVNENYASRQKRLMEDYGFTCNCDRCNVESNWSDNDDTIEEDNAEDGEEVMDEEDQYENMAASDTDNNNDFPHAYFFLRYMCDRPNCGGTLAPLPPQVDSPSNVMECNVCGKLKSDDEQDEAPMED 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05830 410 CDD SET_SMYD 208 310 - -
Arst3g05830 410 SMART set_7 8 290 IPR001214 GO:0005515
Arst3g05830 410 SUPERFAMILY SET domain 8 306 IPR046341 -
Arst3g05830 410 Gene3D - 64 123 - -
Arst3g05830 410 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 405 IPR044238 -
Arst3g05830 410 Pfam SET domain 19 283 IPR001214 GO:0005515
Arst3g05830 410 ProSiteProfiles SET domain profile. 8 284 IPR001214 GO:0005515
Arst3g05830 410 Gene3D - 124 210 - -
Arst3g05830 410 Gene3D SET domain 21 310 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05830 Arst-Chr3 131832454 131835702 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst3g05830 SET 9.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05830 - - gmx:100783406 655.21