Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05800 ATGAGGAGGGTTGCAAGTGCTGTGATGATCCTCTTGTGGTTGTTTTCTTCCACCATGATCATAGGAAACTCATCATCATTGGACAGTGAAACCACTCTCAGAGTGCTTTTGGAAGTGAAGAAATCTTTCGAGCAAGACCCAGAAAACGTTCTGAGTGATTGGTCAGAGGAAAACAAAGATTATTGCAGTTGGAGAGGAGTAACATGCGGATCATCCATTAACTCTAAGTCGGAATTGCAAGTGGTGAGTCTCAACCTTTCTGACTCGTCGCTCACCGGGTCAATATCACACTCACTCGCTCTCTTACAAAACCTGCACCACCTTGATCTCTCTTCCAACAACCTCAACGGTCCCATTCCACCTAATCTCTCTAACCTCACTTCATTGGAATCTTTGCTTCTCTTCTCTAACCAACTCACAGGTCATGTCCCCACTGAGTTGGGCTTGCTCACCAATCTCCGAGTCATGCGACTCGGTGACAACGAACTAACGGGCATCATTCCCGCCTCTCTTGGAAACCTCGTCAACTTGGTCATCCTTGGTTTGGCCACCTGCAGACTCACCGGGTCGATTCCACCGCAACTCGGCCAACTCAGCAATATGGAGAATCTGATACTTAAGGACAACGAGTTAATGGGACCGATTCCGGCCGAGTTGGGAAACTGCACGAGCCTCACTGTCTTCACCGCAGCTAACAACAAGCTCAACGGGTCAATCCCGAGTGAACTGAGTCAACTCAAGACCCTTCAGATTCTTAACCTCGCCAACAACACCTTGTCAGGGGAGATACCGAGTCAACTCGGTGAGATGAGTGAACTCGTTTACCTCAATTTCTTGGGGAACCAACTCGAGGGTGCTATTCCACCATCGTTATCTCAACTGGGGAACCTTCAAACTCTCGACTTGTCAATGAACAAGCTCAGTGGCGGAATCCCAGAAGATTTGGGGAACATGCGTGAGCTATCTTTTTTGGTTCTTTCTGGCAACAACAATCTTAGTGGTGTCATTCCAACAAACATATGTTCCAACGCAACAAAGTTGGAGCATATGTTTCTGTCAGATATTGGAATTCATGGTGAGATTCCATCTTCATTGGGCCAATGCCAGTCACTGAAACAACTTGATTTGTCCAACAACTCACTCAATGGGTCCATTCCCATTGAAATTTATGGATTGCTCTCGTTAACTGATCTCTTGCTCCACAACAACACATTGGTTGGTTCAGTTTCTCCCTCAATTGGAAACCTCAGTAGCTTGCAGATGCTTGCATTGTACCACAACAATTTGCATGGTCCTCTGCCTGAAGAGATTGGGATGCTTCGGGAGTTGGAAATCTTGTATCTTTATGATAATCAATTGTCAGGGGATATACCCATGGAGATTGGGAACTGTTCCAGCTTGCAAATGATTGATCTCTTTGGGAATCATTTCAGTGGTGAAATTCCAAAATCCATTGGAAGGCTGAAAGAATTGAATTTCCTTCACCTAAGGCAGAATGGACTTGTTGGTGAAATTCCTGCCACACTTGGTAACTGTCATAAGCTGAATATTCTGGATTTAGCAGATAATCAACTCTCAGGTGGAATCCCTGCAACACTTGGATACCTCAAGTCATTGGAACAGTTGATGCTCTACAACAATTCTCTTGAAGGTAACCTCCCTCACCAACTCACAAATGTAGCAAACTTGACCAGAGTGAATCTTTCTAAGAACAGACTGAATGGTAGTATGACTGCATTGTGTAGCTCTAGATCGTTTCTTTCCTTCGATGTCACGAACAATGCCTTTGATGGTGAAATTCCTCCCCAATTAGGAAATTCACCCTCACTTGAGAGGCTAGGATTAGGTAACAATAGATTTTCTGGTGAAGTTCCAAGGACACTGGGAAAGATCCATGAGTTGACACTGTTAGACCTCTCAGGGAATGCACTCAGTGGACCAATACCAGATGAGCTCTCTTTATGCAACAGACTGTCTTACATTGATTTACACAATAATTTTATGTCTGGCCAAATACCAACTTGGGTTGGAAGTTTGCCTCAGCTTGGGAAGCTTATCCTTTCCTTCAATAATTTTTCTGGACCAATTCCATTAGGCTTATTCAGATGTTCCAAATTGCTGGTTCTTGACCTGAATGACAATTCTCTCAATGCTAGTCTCCCAGCTGAAGTTGGTGATCTTGCATCCCTTAACGTTCTCAGACTTGGCCATAATAAGTTATCTGGACCGATCCCTGCAGCAATAGGCAAGTTGAGCAAGCTTTATGAGCTGCAGCTATCTAATAATAGCTTCAATGGTGAGATTCCAACAGAAATTGGAAAACTCCAAAATCTCCAGACCAGTTTAGACCTCAGTTACAACAATCTCTCAGGTGAAATCCCAGCTTCTCTTGGGAATCTGTTAAAATTAGAAGCACTTGATCTTTCCCACAATCAACTCACTGGAGAAGTCCCTCCACAAGTTGGTGACATGAGCAGCTTGGGAGTGCTTGATCTCTCCTACAACAACCTTCAAGGAAAATTGGACAGGAAATTCTCTCATTGGCCGGACGAGGCATTTGAAGGGAACCAACAGCTTTGTGGAAGCCCTCTTGATCACTGCAACAGTGATGATGCTTCCAGCAGAGATCAATCAGGCCTAAATGCACCATCAGTAGTGGTAATATCTGCCATTTCAACTCTAGTTGCAATTGCGCTATTTATACTTGCATTCAAAGCCTTCTTCAGAAACAAACCAGAACATTTCAAGAGAGACAGTGAAGCGAATTATGTGTACTCCTCCTCTTCATCACAAGCACAGCGAAGGCCGCTGTTCCAACTCAACCCTGCTGGAAATCGAGATTTCAGGTGGGAAGATATCATGGATGCAACAAACAATTTAAGCGATGAATTCAAGATTGGTTCAGGGGGGTCAGGGACAATCTACAAAGCTGAATTGGCCAATGGAGATACAGTGGCTGTCAAGAAGATTTCAGCGAAAGATGATTTTCTGCTGAACAAAAGCTTCATAAGAGAAGTTAAGACACTTGGGAGGACAAGGCACAGGCATCTTGTGAAGCTTATAGGTTACTGTGGCAATAATGCAAACAAAGGAGCAGCTTGGAATCTGTTGATATATGAGTATATGGAGAATGGGAGTGTATGGGATTGGCTTCATGGGAAGCCAGCTATGGCCAGCAAAGTGAAGAGGAGCCTTGATTGGGAGACAAGGTTCAGAATTGCAGTGGGACTAGCTCAAGGAGTGGAGTACCTCCACCATGATTGTGTGCCAAAGATCATTCACAGGGATATTAAATCCAGCAACATATTGCTAGATTCCAAAATGGAAGCACACTTGGGAGATTTTGGACTTGCAAAAGCAATCTTCGAGAATTATGACTCCAGAACCGAGTCTAATTCTCTGTTTGCAGGATCTTACGGCTACATGGCTCCAGAGTACGCATACTCCCTACGTGCAACAGAAAAGAGTGATGTTTACAGCATGGGAATTGTGCTTATGGAGCTTGTTAGTGGTAAAACGCCAACAGATGAAACTTTTGGAGCAGAGATGGATATGGTGAGATGGGTGGAGATGCACATGGATATGCATGGCGCTGCACGCGAGGACGTGATAGATCCTGAGCTGAAACCTCTCTTGCCTGCTGAAGAGTTTGCGGCATTCCAAGTGCTTGAGGTAGCATTGCAGTGCACCAAAACTACACCACAGGAGAGGCCATCCTCCCGGAAAGTATGTGATCTTCTCCTCCATGTATTCAACAACAGAATGGCCCAGTTTGATAAGATGAATTTGGATCAGTACAAATTCAAGTGA 3810 0.4441 MRRVASAVMILLWLFSSTMIIGNSSSLDSETTLRVLLEVKKSFEQDPENVLSDWSEENKDYCSWRGVTCGSSINSKSELQVVSLNLSDSSLTGSISHSLALLQNLHHLDLSSNNLNGPIPPNLSNLTSLESLLLFSNQLTGHVPTELGLLTNLRVMRLGDNELTGIIPASLGNLVNLVILGLATCRLTGSIPPQLGQLSNMENLILKDNELMGPIPAELGNCTSLTVFTAANNKLNGSIPSELSQLKTLQILNLANNTLSGEIPSQLGEMSELVYLNFLGNQLEGAIPPSLSQLGNLQTLDLSMNKLSGGIPEDLGNMRELSFLVLSGNNNLSGVIPTNICSNATKLEHMFLSDIGIHGEIPSSLGQCQSLKQLDLSNNSLNGSIPIEIYGLLSLTDLLLHNNTLVGSVSPSIGNLSSLQMLALYHNNLHGPLPEEIGMLRELEILYLYDNQLSGDIPMEIGNCSSLQMIDLFGNHFSGEIPKSIGRLKELNFLHLRQNGLVGEIPATLGNCHKLNILDLADNQLSGGIPATLGYLKSLEQLMLYNNSLEGNLPHQLTNVANLTRVNLSKNRLNGSMTALCSSRSFLSFDVTNNAFDGEIPPQLGNSPSLERLGLGNNRFSGEVPRTLGKIHELTLLDLSGNALSGPIPDELSLCNRLSYIDLHNNFMSGQIPTWVGSLPQLGKLILSFNNFSGPIPLGLFRCSKLLVLDLNDNSLNASLPAEVGDLASLNVLRLGHNKLSGPIPAAIGKLSKLYELQLSNNSFNGEIPTEIGKLQNLQTSLDLSYNNLSGEIPASLGNLLKLEALDLSHNQLTGEVPPQVGDMSSLGVLDLSYNNLQGKLDRKFSHWPDEAFEGNQQLCGSPLDHCNSDDASSRDQSGLNAPSVVVISAISTLVAIALFILAFKAFFRNKPEHFKRDSEANYVYSSSSSQAQRRPLFQLNPAGNRDFRWEDIMDATNNLSDEFKIGSGGSGTIYKAELANGDTVAVKKISAKDDFLLNKSFIREVKTLGRTRHRHLVKLIGYCGNNANKGAAWNLLIYEYMENGSVWDWLHGKPAMASKVKRSLDWETRFRIAVGLAQGVEYLHHDCVPKIIHRDIKSSNILLDSKMEAHLGDFGLAKAIFENYDSRTESNSLFAGSYGYMAPEYAYSLRATEKSDVYSMGIVLMELVSGKTPTDETFGAEMDMVRWVEMHMDMHGAAREDVIDPELKPLLPAEEFAAFQVLEVALQCTKTTPQERPSSRKVCDLLLHVFNNRMAQFDKMNLDQYKFK 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05800 1269 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 287 387 - -
Arst3g05800 1269 Gene3D Ribonuclease Inhibitor 331 580 IPR032675 -
Arst3g05800 1269 Gene3D Transferase(Phosphotransferase) domain 1 1042 1267 - -
Arst3g05800 1269 Gene3D Ribonuclease Inhibitor 331 580 IPR032675 -
Arst3g05800 1269 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Arst3g05800 1269 Pfam Leucine Rich Repeat 104 126 IPR001611 GO:0005515
Arst3g05800 1269 PRINTS Leucine-rich repeat signature 800 813 - -
Arst3g05800 1269 PRINTS Leucine-rich repeat signature 371 384 - -
Arst3g05800 1269 Gene3D Ribonuclease Inhibitor 581 876 IPR032675 -
Arst3g05800 1269 FunFam Uncharacterized protein 388 481 - -
Arst3g05800 1269 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 921 1041 - -
Arst3g05800 1269 Pfam Protein kinase domain 964 1244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05800 1269 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 579 871 - -
Arst3g05800 1269 SUPERFAMILY L domain-like 330 666 - -
Arst3g05800 1269 ProSiteProfiles Protein kinase domain profile. 960 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05800 1269 SUPERFAMILY Protein kinase-like (PK-like) 942 1247 IPR011009 -
Arst3g05800 1269 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 482 578 - -
Arst3g05800 1269 SUPERFAMILY L domain-like 45 405 - -
Arst3g05800 1269 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 200 271 - -
Arst3g05800 1269 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 501 1246 - -
Arst3g05800 1269 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 501 1246 - -
Arst3g05800 1269 ProSitePatterns Protein kinases ATP-binding region signature. 966 989 IPR017441 GO:0005524
Arst3g05800 1269 Gene3D Ribonuclease Inhibitor 193 330 IPR032675 -
Arst3g05800 1269 ProSiteProfiles Leucine-rich repeat profile. 104 127 IPR001611 GO:0005515
Arst3g05800 1269 Pfam Leucine rich repeat 753 813 IPR001611 GO:0005515
Arst3g05800 1269 Gene3D Phosphorylase Kinase; domain 1 920 1041 - -
Arst3g05800 1269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1092 1104 IPR008271 GO:0004672|GO:0006468
Arst3g05800 1269 Gene3D Ribonuclease Inhibitor 30 192 IPR032675 -
Arst3g05800 1269 SMART LRR_typ_2 727 751 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 440 464 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 294 318 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 150 173 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 800 823 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 775 799 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 824 855 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 246 270 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 488 512 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 536 560 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 102 126 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 174 198 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 631 655 IPR003591 -
Arst3g05800 1269 SMART LRR_typ_2 679 703 IPR003591 -
Arst3g05800 1269 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 195 - -
Arst3g05800 1269 FunFam Leucine-rich repeat receptor-like protein kinase 1042 1264 - -
Arst3g05800 1269 SMART serkin_6 960 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05800 1269 SUPERFAMILY RNI-like 581 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05800 Arst-Chr3 131663976 131668597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05800 27 1250 Receptor kinase-like Gene Family AT5G07280 36.645 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst3g05800 Pkinase 8.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05800 - - aip:107632121 2047.32