Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05789 ATGCATGAGCAACCTGGTTGCTTTGATCCCAACACAATGGCAGAAGGTGTCAGTACTCCAAAACTAAAAGATACCTTTCCTCAAACTCTCTCAGACCCATCATCATCACCATCACCACTTATTGTTGTAGGCAACACTACAAACAGCAACAATAACCTTGAAGAGAATATCAGACTTTCTATGGAGGAGTTATCCTATCACCACCAGCAAGAAGATGTCTCCAACTATGTAAATGGAGTCACTGCCACAACCATAGATATCCCACATCCACAGCATCTTGGTTTGAATATGGGTAACTCCTACAACAACAATATCAACATGGATTCCCATTTGGTTCAGCATGAAATTGATATCCTTCCCTATCAGCAACCCACTTGGGATCCCAATGTTCAGGAAATGCAAGATATGGGTTATACTAATCACTCAGAACACCAACCACATGATCAGCAATTTCAGCAAACTGAGGCACAGAACTGCAGCCAAAGTTACAATCCCTCCTCCATTTTGGACCCGCCTTACCCTTCACAAGATCTCCTAAACCTTCTTCACTTGCCAAGATGTTCAACTTCGTCTTTGCTTGCCAACCCTGCTATCTGCATCGCAAACAAGACACAGAATTTTCAGAATCCGATGGGATTTCTTGGGGACCTTCCAATAGGATCAGACAACACAAGTGCATCCTCAGTATTGTATGATCCTCTACTCCATTTGAACCTGCCTCCACAGCCTCCAGCCCTCAGAGAGCTGTTTCAGTCTCTTCCCCGTGGCTACAGCTTGCCAACGAACTCAAGAAGTGGTTCTCTTTTCGGTGGAGGGGATGAGATTGAAGGAGATGGAAGCCAACTTGACATGGGAGTGCTCGACTTCAACAGGGTCACAGCTTCAGTGGGCAAAGGAAGGGAAGGAAAAGGCACCAAACACTTTGCAACTGAGAAACAAAGAAGAGAGCAACTGAATGGCAAATACAAAATCCTGAGGAGTCTTATCCCAAGCCCCACAAAGATGGATAGAGCCTCTGTGGTGGGTGATGCCATTGAATATATAAGGGAGCTTCTCAGAACGGTCAATGAGCTCAAATTATTGGTGGAGAAGAAAAGATATGGAAGGGAGAGATGCAAAAGGCAGAAAGCGGAAGATGATGCTGCAGAGAGCTGCAATATAAAGCCTTTCAGTGATCCAGATGGATGCATAAGGACCTCATGGCTTCAAAGGAAATCAAAAGATAGCGAGGTTGATGTGCGAATTGTTGATGATGATGTTACAATCAAACTCTTCCAGAGGAAGAAGATTAACTGTCTGCTTTCAGTCGCCAAGGTTCTGGATGAACTTCAGTTGGAACTTCACCATGTTGCAGGTGGACATGTTGGCGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATAGAAGGTTCTTCAGTCTATGCCAGTGCTATAGCCAACAGGGTGATCGATGTTATGGACACTCAGTATGCAGCAGCAGTTCCACATACAAGTAGCTATTAG 1503 0.4431 MHEQPGCFDPNTMAEGVSTPKLKDTFPQTLSDPSSSPSPLIVVGNTTNSNNNLEENIRLSMEELSYHHQQEDVSNYVNGVTATTIDIPHPQHLGLNMGNSYNNNINMDSHLVQHEIDILPYQQPTWDPNVQEMQDMGYTNHSEHQPHDQQFQQTEAQNCSQSYNPSSILDPPYPSQDLLNLLHLPRCSTSSLLANPAICIANKTQNFQNPMGFLGDLPIGSDNTSASSVLYDPLLHLNLPPQPPALRELFQSLPRGYSLPTNSRSGSLFGGGDEIEGDGSQLDMGVLDFNRVTASVGKGREGKGTKHFATEKQRREQLNGKYKILRSLIPSPTKMDRASVVGDAIEYIRELLRTVNELKLLVEKKRYGRERCKRQKAEDDAAESCNIKPFSDPDGCIRTSWLQRKSKDSEVDVRIVDDDVTIKLFQRKKINCLLSVAKVLDELQLELHHVAGGHVGEYCSFLFNSKIIEGSSVYASAIANRVIDVMDTQYAAAVPHTSSY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05789 500 Pfam Helix-loop-helix DNA-binding domain 305 351 IPR011598 GO:0046983
Arst3g05789 500 PANTHER TRANSCRIPTION FACTOR BHLH91 2 493 IPR045895 GO:0006355|GO:0048658
Arst3g05789 500 Gene3D - 299 380 IPR036638 GO:0046983
Arst3g05789 500 MobiDBLite consensus disorder prediction 1 38 - -
Arst3g05789 500 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 302 351 IPR011598 GO:0046983
Arst3g05789 500 MobiDBLite consensus disorder prediction 139 163 - -
Arst3g05789 500 MobiDBLite consensus disorder prediction 22 38 - -
Arst3g05789 500 SMART finulus 308 357 IPR011598 GO:0046983
Arst3g05789 500 CDD bHLH_AtMYC1_like 307 371 IPR045896 -
Arst3g05789 500 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 303 369 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05789 Arst-Chr3 131486037 131488794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05789 1 498 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 35.793 1.96e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g05789 HLH 4.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05789 - - gmx:100801349 761.525