Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05776 ATGGAGGCTGAAACTACTCTTGTCCCTCCCACGGCCACACCACCACCACCACCACCTCATAATGGTGGTTTGGATTGGACAGTTGTAGCGGCGGCCATCGTGTGTGCCTTGCTATGCGCTCTAGGGCTCAACACCATGCTACAATGCGTGTTTCAGTGTGCGGGGCGTGTTCTCACGCAGCCTCTTCAATGGATCGCTTCTCGAAGGCTCAATTCCGGTCTCAAGAGGAAGGACATGGTGGCTCTCCCTACCTCAACTTTTTCTTCTTCTTCTTCTTCTTCTGAAGCAGCTCCTAGTAACAATAATAATAACAACTGTGCAATATGCTTAGCAGAGTTCAGTGATGGTGAGCAAATAAGGTTTCTTCCGCAGTGCAGTCACCATTTTCACGTGGTTTGCATTGACAAGTGGCTCCTCTCTCATTCTTCTTGTCCTACTTGCAGGCACCTCCTCAAGTCTAATTCTGATTCTTCTTCGCTCCACTCTTTACATATCCTCTTAGCTTAA 507 0.4832 MEAETTLVPPTATPPPPPPHNGGLDWTVVAAAIVCALLCALGLNTMLQCVFQCAGRVLTQPLQWIASRRLNSGLKRKDMVALPTSTFSSSSSSSEAAPSNNNNNNCAICLAEFSDGEQIRFLPQCSHHFHVVCIDKWLLSHSSCPTCRHLLKSNSDSSSLHSLHILLA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05776 168 Pfam Ring finger domain 104 148 IPR001841 -
Arst3g05776 168 CDD RING-H2_EL5-like 106 148 - -
Arst3g05776 168 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g05776 168 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Arst3g05776 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 153 IPR013083 -
Arst3g05776 168 PANTHER RING-H2 FINGER PROTEIN ATL78 18 156 IPR044602 GO:0016567|GO:0016740
Arst3g05776 168 SMART ring_2 106 147 IPR001841 -
Arst3g05776 168 SUPERFAMILY RING/U-box 100 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05776 Arst-Chr3 131410847 131411684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05776 11 151 C3H Transcription Factor Family AT2G17450 44.444 1.02e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05776 - - gmx:100779286 199.134