Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05735 ATGGTTGCTAACACCAGGTTCATAACATTGCAGAAATTACCAATAACGTTCACTGAAAAATATGGTTCTGGCCTATCAAACTCATTGTATCTTAACCCTCCAGATGATATTGAATGGAGAGTAGATTGGACTAATCATGATGGTGAAATTTTGTTTAAAAAGGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATCATGGCTATTTGTTATGGTTTAAGTATAATATTAGAACTTCTCACATTAAAGTACACATATTTGACATGAGTTGCCTCCAAATAGAGTATCCTGCCAATGATCAAATCAAAGAGCAGCTGCCACGCAGGGGTCAGCAGCAGCCGGTGAAAAGGCCAGAAGAACCAAAAACTAGAGATGTGGATAGCAGTTCTAACACCCAAAACATGAGACTTAACCAGGGACGACAGAAGAAAAGATTGTATGAACAATTGCCAAGAGATGTCCAGGGCCAACTGAGAAAAAAACTGAGAGCACTAGTGTCATCTGCTTCTAAAGGTAGACAGTTGAAAAATGACACACAAATCAGGGATTTGGAAAGAAGCCTCAGTTTGCACAATATTAAATCCAAAGAAAAAAACCATGAGATGCCAGTCTCTGTCAATCAAGATTCTAATGGCAAAAGGAATAGAGGAAAAGATTCTTTATCTTCTGTTAGGCCCTGTCCTACAAGACCTGAATCTCTGAAAGAAGCTAAGAAGTTTAAGTGGGAAAAGCCCTCTTTCATCATCAAGATAACGCAACGGTCACAATCGAGAGCACCATGTAATCACTTTTCAAACCAGTGA 804 0.3881 MVANTRFITLQKLPITFTEKYGSGLSNSLYLNPPDDIEWRVDWTNHDGEILFKKGWKEFVAYYSLDHGYLLWFKYNIRTSHIKVHIFDMSCLQIEYPANDQIKEQLPRRGQQQPVKRPEEPKTRDVDSSSNTQNMRLNQGRQKKRLYEQLPRDVQGQLRKKLRALVSSASKGRQLKNDTQIRDLERSLSLHNIKSKEKNHEMPVSVNQDSNGKRNRGKDSLSSVRPCPTRPESLKEAKKFKWEKPSFIIKITQRSQSRAPCNHFSNQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05735 267 SUPERFAMILY DNA-binding pseudobarrel domain 12 97 IPR015300 -
Arst3g05735 267 PANTHER B3 DOMAIN-CONTAINING 12 206 - -
Arst3g05735 267 MobiDBLite consensus disorder prediction 104 153 - -
Arst3g05735 267 MobiDBLite consensus disorder prediction 192 236 - -
Arst3g05735 267 ProSiteProfiles B3 DNA-binding domain profile. 1 90 IPR003340 GO:0003677
Arst3g05735 267 CDD B3_DNA 13 88 IPR003340 GO:0003677
Arst3g05735 267 Pfam B3 DNA binding domain 12 88 IPR003340 GO:0003677
Arst3g05735 267 Gene3D - 3 91 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05735 Arst-Chr3 131082007 131083978 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05735 12 96 B3 DNA Binding Superfamily AT3G18990 40.000 4.95e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst3g05735 B3 9.1e-09 CL0405