Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05732 ATGGCCGATGAACCAATGCCCACTCGCTGGTCCTTCCAGGACTTCAAATTGAATTATGATGCGATGTTTGGGAGGAAGAAAGTGGTGGAGAATGGTGAGGCAGCTGATAAAGCTGTTGGTAATGGAAACTTATTGAACCATGCATCCAACGGCAATCTGCAAGCTAAAAGATCATCTGATATGACAATCTTTGAGCAGTTTCAGAGCCAGGGGCAGAATCCGGCGCAGACAAATGGCTTTTCACCAAACCATGGGGACGAAAGGCCGCAAAAGTCTTTGCTTCCACCTTTTGAATCTGCAGAGATGCGTGCTTTAGCAGAGAGCTTAAGTAGGGATATAATTCGTGGGAGTCCAAATGTGAAGTGGGAAAGCATCAAGGGGTTAGGGAATGCCAAACTTTTGCTAAAAGAGGCTGTTGTGATGCCAATTAAGTATCCCAAGTACTTTACTGGTCTGTTATCTCCATGGAAAGGCATTCTCCTTTTTGGCCCACCAGGGACAGGAAAGACAATGCTTGCAAAGGCTGTTGCAACAGAGTGCCAGACTACATTTTTTAATATTTCAGCATCATCTGTTGTCAGCAAATGGCGAGGTGATTCCGAGAAGTTGATAAAGGTGTTATTTGAGCTTGCAAGACACCATGCCCCCTCAACCATATTTCTTGATGAAATTGATGCAATCATTAGTCAACGCGGTGAAGCACGCAGTGAACATGAAGCAAGTAGACGACTAAAAACTGAACTACTCATACAGATGGACGGTTTGGCCAAGACTGATGAGCTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCCATGCTCCGCCGTCTTGAGAAGCGAATCCTTGTACCACTCCCAGAACCAGAAGCAAGAAGATCCATGTTCGAGGAACTCCTTCCTCCACAGCCTGATGAGGAAGAGATCCCCTATGATTTGCTAGTGGAGCGGACCGAAGGATATTCAGGGTCAGATATCCGGTTACTCTGCAAAGAGACAGCAATGCAGCCTTTGAGACGCCTAATGTCTCAACTTGAACAGAGACAAGAGGTGGTACCGGAAGAAGAGTTGCCAAAAGTTGGGCCAATCAGGTATGAAGATATAGAAGCAGCATTGAAAAACACAAGGCCATCTGCTCACCTACATGCCCATAAATATGAAAAGTTTAATGCTGATTATGGCAGTCAAATACTTCACTGA 1212 0.453 MADEPMPTRWSFQDFKLNYDAMFGRKKVVENGEAADKAVGNGNLLNHASNGNLQAKRSSDMTIFEQFQSQGQNPAQTNGFSPNHGDERPQKSLLPPFESAEMRALAESLSRDIIRGSPNVKWESIKGLGNAKLLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECQTTFFNISASSVVSKWRGDSEKLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLAKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRSMFEELLPPQPDEEEIPYDLLVERTEGYSGSDIRLLCKETAMQPLRRLMSQLEQRQEVVPEEELPKVGPIRYEDIEAALKNTRPSAHLHAHKYEKFNADYGSQILH 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05732 403 Pfam ATPase family associated with various cellular activities (AAA) 159 289 IPR003959 GO:0005524|GO:0016887
Arst3g05732 403 Gene3D - 118 394 IPR027417 -
Arst3g05732 403 MobiDBLite consensus disorder prediction 69 85 - -
Arst3g05732 403 FunFam Katanin p60 ATPase-containing subunit A-like 2 118 302 - -
Arst3g05732 403 CDD RecA-like_VPS4-like 125 288 - -
Arst3g05732 403 MobiDBLite consensus disorder prediction 69 92 - -
Arst3g05732 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 386 IPR027417 -
Arst3g05732 403 Pfam AAA+ lid domain 316 352 IPR041569 -
Arst3g05732 403 Gene3D - 291 379 - -
Arst3g05732 403 SMART AAA_5 155 292 IPR003593 GO:0016887
Arst3g05732 403 PANTHER AAA DOMAIN-CONTAINING 61 399 - -
Arst3g05732 403 FunFam Katanin p60 ATPase-containing subunit A-like 2 291 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05732 Arst-Chr3 131012304 131017289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05732 153 362 Calmodulin-binding Proteins AT3G56690 35.681 5.15e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05732 K07767 - gmx:100794098 686.026