Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05729 ATGGAATTCACCTCTTTTTTATGTGAAATCAATTCCATTGAATACCCAACAGTACCACAAGACTTCTATTTTTCTGATTTCTTCTCCATCATGTTCAGTCTCACCAAAGAATTGATCCAAATTGACTTTTCTTCTTCTACAATTACTACTCTCAATGAAGCGTTCTTGGTTCCCTTCGATGTCCTGCGTAACGGAGAAGACACTGCATTCTTACATGAAATATTCTCTTCAATGCCTATATCTCCTCAGATATTAGACCAAATTTTACTTTTTATGGGCAGAACTGCAAGAACAATTCTAAGCCGTGAAGGGTGTGAGTCCAGCATGCCAGAGATTGTTGTGAACCTTTATGTTGTTGTTATCCAAGATTCTGATTTCTATAATGATGATGTCCGTCAAGATGTTCCTGAACTAGTCCGACTTGTGAATCTGTTGGAGAGATCCAAAATTGATGAGCAAGATGATGATGCTGAACAATGCAGTATTTGCTTGGAAGAGTTTGGACATGGTATCCAAGATTCAAGTGTAAAAGTTGTTCGCACAAAGTGCTCGCATGTGTTCCATGAAAGCTGCATGCTCCGTTGGCTGCGGCATTGTGCCGACCATCAATCACCCTATTTTTGCCCATTGTGCCGCTGCATTATATTTCCAACTTCGCAGAGAGATGAATAG 672 0.4003 MEFTSFLCEINSIEYPTVPQDFYFSDFFSIMFSLTKELIQIDFSSSTITTLNEAFLVPFDVLRNGEDTAFLHEIFSSMPISPQILDQILLFMGRTARTILSREGCESSMPEIVVNLYVVVIQDSDFYNDDVRQDVPELVRLVNLLERSKIDEQDDDAEQCSICLEEFGHGIQDSSVKVVRTKCSHVFHESCMLRWLRHCADHQSPYFCPLCRCIIFPTSQRDE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05729 223 SMART ring_2 160 211 IPR001841 -
Arst3g05729 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 216 IPR013083 -
Arst3g05729 223 SUPERFAMILY RING/U-box 159 217 - -
Arst3g05729 223 Pfam Ring finger domain 159 212 IPR001841 -
Arst3g05729 223 ProSiteProfiles Zinc finger RING-type profile. 160 212 IPR001841 -
Arst3g05729 223 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 108 213 - -
Arst3g05729 223 CDD RING-H2 160 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05729 Arst-Chr3 130979187 130979858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05729 144 216 C3H Transcription Factor Family AT4G12190 38.158 1.21e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05729 - - adu:110273516 326.25