Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05727 ATGGCGGGAAGGGCTAAACGGAAAACCTCTGCTTCTGCTTCACCCTCTTCTTCTGTTCCTTCCCGCAAACTAGTGTTGAACATCAAAACAAGCAGGGGGATGAAGAGATCACTGCGGCAGGCTAATTCGAGAAAGAAACCCAAAGCAAAACAAAAGATTGATGCTAAGAAGCCAAAGAAACCTCCCACTGCTTTCTTCTACTTCTTGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAACCCCGATGTCAAGTCAATGCGAGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACGATGACTTATGAGGAGAAGGTTCAATACTATGATATAGCAACAGAAAAGCGCGCAGAATTTGATATGGCAATGGCAGAATATAATAAGAAAATGGAAAACGGTGAATTTGAAGACACTGATGAAGAATCGGATTTTGATGAATAA 441 0.4172 MAGRAKRKTSASASPSSSVPSRKLVLNIKTSRGMKRSLRQANSRKKPKAKQKIDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDMAMAEYNKKMENGEFEDTDEESDFDE 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05727 146 MobiDBLite consensus disorder prediction 9 25 - -
Arst3g05727 146 MobiDBLite consensus disorder prediction 38 55 - -
Arst3g05727 146 Gene3D High mobility group box domain 41 142 IPR036910 -
Arst3g05727 146 SMART hmgende2 57 128 IPR009071 -
Arst3g05727 146 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 35 143 IPR031061 -
Arst3g05727 146 MobiDBLite consensus disorder prediction 1 60 - -
Arst3g05727 146 SUPERFAMILY HMG-box 44 129 IPR036910 -
Arst3g05727 146 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 58 127 IPR009071 -
Arst3g05727 146 CDD HMG-box_AtHMGB1-like 59 119 - -
Arst3g05727 146 Pfam HMG (high mobility group) box 58 127 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05727 Arst-Chr3 130959172 130961940 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Arst3g05727 HMG_box 3.9e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05727 - - gmx:100809401 180.644