Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05715 ATGTGGGTCCACACTCTCATTAAATTCACCAATGCATGTCCACTTTCAACTTCATCATTCGAATGCTCAAACTCAAGTGTGTATATATATATAGGCTTCATTTACTTCACATTTCATATCACCAACGAGCAACTAAACATTCTTAAAAATATTCTACAAATGATGTTGCTTTCTCCTAAGATTAGTTTGAGTGTAGTCATAGCCCTTTCCATTGTAACCATACTTTCATATGCAGATAATAATACTGGAATCTTGGAGGTTGAAATTGAAGCCTTGAAAGCTTTCAAGAACTCCATCACCCTTGACCCAAATGGAACACTTGCTGATTGGATTGAAATCCACCCTCATTGCAATTGGTCTGGCATTCAATGTGACCCTTCTTCAAGCCATGTGATCTCAATTTCTCTGACTTCTCAGCAGCTCCATGGAGAGATTTCACCATTCTTGGGAAATATTTCAAGCCTTCAGGTTCTTGATTTATCTTCAAATTCATTTACCGGCCATATTCCTTATCAGCTAAGTCGTTGCACTCAACTCACTGTGCTTGGTCTCTTTGAGAATTCTCTCTCAGGACCAATCCCTCCTGAGTTAGGAAACTTGAAAAGATTGCAGTATTTGGATTTAGGAAGTAACTTCTTGAATGGAACCCTTCCTGAGAGCATATTCAACATCACTTCTTTGTTGGGAATTGCTTTCAATAACAACAACCTCACAGGCACAATACCATCACACATAGGCAAGCTCCTTAACCTTATTCAGATGATAGGATATGGGAATAGCTTGGTTGGGTCTATACCTCCTTCAATAGGGAATCTTGAAGCTTTGCAGGCTCTTGATTTTAGCCAAAACCAGTTATCAGGTGTAATACCTAAAGAGATTGGAAACCTGACAAATTTACAATCCCTTCTCTTGTTTCAAAATTCATTGTCTGGTAAAATCCCTTCAGAACTTGCTAAGTGTAAGAATCTCTTAAACCTTGAGTTGTATGAAAATCACTTGTCTGGAAGTATTCCTCCTGAGCTAGGAAACTTAGTTCATTTGGAAACATTGAGGATATTCAGCAATAACTTGAACTCCACTATTCCACCTTCCATATTCCAATTGAAATCATTGACACATTTAGGCCTCTCAGACAATAACTTGGAGGGAACAATATCTCCTGAGATAGGATCTTTGAGTTCCTTAACATACCTAACCCTGCATCTAAATAAGTTTACCGGCCGCATCCCTTCATCCATAACAAGCTTGAAAAACTTAACATATCTTTCAATGAGCCAGAATCTTCTTTCAGGTGAAATTCCTTCAGACATTGGTGTGCTTCATAATTTGAAGTTTCTAATCTTGGGCTTCAACCATTTACATGGTTCCATCCCTCCTAGCATTACCAGTTGTACTAGCTTGGTAAATGTAAGCTTAGCTTTCAATTCATTCACTGGCAAAATTCCTGAGGGCTTTTCTAGGATGCCTAATCTTACTTTCCTATCTTTTGCCCACAACAACTTGTCCGGGGAAATCCCGGACGACCTTTTCAACTGCTCAAACCTTCATACACTAAGTTTGGGAGAGAACAATATGAGTGGAGTAATAAAACCAGGCATTCAAAACCTGTTTAAGGTTCAGACTCTGCAGCTGAATGTAAATTCCTTCATAGGATCAATTCCACCAGAGATTGGAAACTTAAGTCAGCTCATCACTTTAACCCTTGCTGAAAACAAGTTATCTGGTTCAATTCCACCAGAATTGTCCAAACTTTTTCTTCTGCAGGGGCTCTCCCTCCATGACAATGAGTTAGAAGGTACAATACCTGATACACTCTCTGGTATCAAACCACTAACAACGCTTTTGCTGCATAGAAACAAGTTGGTTGGTCAGATACCAGATTCTATCTCACAGCTTGATATGCTTTCATATTTGGATCTCCATGACAACAAGCTGAATGGTTCCATTCCAAGAAGCATGGGGAAGCTTAGTAAGCTTTTGATGTTGGATCTCTCTCACAACCACCTCACAGGATCAATTCCTAGTGATGTCATTGCACACTTCAAAGACATGCAGATGTATCTCAACCTTTCTTACAACAACTTTGCTGGAAGTGTTCCATATGAGTTGGGCATGTTGCAAATGGTACAGGCCATTGATATTTCAAACAATAATCTTTCAGGTGTCATTCCCAATAGAATTTCCGGGTGCAGAAATCTGTTCAATCTTGATTTTTCAGGAAACAAGATTTCAGGTCCAATTCCTGCAGAAGCTTTTAGTCACATGGACTTGCTTGAAAACTTGAATCTTTCAAGAAACCATTTAGATGGTAAAATCCCTGAAGTCTTGGCACAACTTGAGCATCTCATTTCCATAGATCTTTCTCAGAATAACTTGAAGGGAACAATTCCTCAGGGCTTTGCCAATCTCTCCAAGCTGATGCATCTCAACCTTTCTTTCAATCAACTTGAAGGCCCTGTGCCCATGACTGGAATATTTGCACATATCAATGCATCTGATATGAAGGGAAACCAGGATCTTTGTGGAGCAAAATTCTTAAGGCCATGCAAAGAAGGTAATAATCATGCTCTATCCAAGAGGAGCATAGCTATTATCGCTGCCCTTGGATCTCTTGCAATACTTCTACTTCTAGTGCTTGTGATTTTGATTCTCAATCGAGGCAACAAACTTTGCAATTCTAAACAAAAAGAGAATGGTGAGAATCAAGAACCAGATTACAGGACAGCATTGGCTCTTAAAAGATTCAGTCCAAGGGAGTTAGAGAATGCCACTGGCTTATTCAGCACTGACAACATCATTGGTGCTAGCAATTTGAGCACAGTTTACAAGGGACAACTTGAACAAGGCCAGATTGTAGCTGTCAAAAGATTGAACTTGCATCAATTCTATGCAAACACAGATAAGATCTTCAAAACAGAAGCCAGCACCTTGAGCCAGCTGAGGCATAGAAATTTGGTGAAGGTGCTTGGTTATGCCTGGGAGAGTGGGAAATTGAAAGCTCTAGTTCTAGAATACATGGAAAATGGGAATTTGGATACCATCATACACGACAAATCGGTCGATCAGTCTAGGTGGACATTATCTGAAAGAATCCGTGTTCTGATTTCTATTGCTAGCGGATTGGACTACTTACACTCTGGTTATGACTTTCCCATTGTGCACTGTGACTTAAAACCTTCTAACATCCTTTTGGATAGAGACTGGGAAGCTCATGTCAGTGATTTTGGGACAGCTCGAATTCTTGGACTTCATTTACAGGATGGTAATACCCTTTCCTCATCTGCAGCTTTGCAAGGCACAATTGGCTATCTTGCACCAGAAATTGCCTACATAAGGAAAGTTACACCTAAAGTGGACGTGTTCGGTTTTGGCATCATTGTAATGGAATTTCTAACAAAAAGAAGGCCAACAGGACTCTCAGAAGAGGATGATGGCCTGCCAGTAAGTCTGCCTGAGGCAGTAGAAAAAGCCGTCGCAAACGGAATGAAGGAGCTCATTAATATTGTAGACCCTATGCTGGCCATGGATGACACAAAAGGCCATGTTGATGCATTGGTAGGACTCTTCAAGTTATCCTTGTGTTGTACTCTCCCCAATCCTGAAGATCGACCTAACATGAATGAGGTGTTATCTACTCTTATGAAGCTTCAAACAGCAAGATAA 3663 0.401 MWVHTLIKFTNACPLSTSSFECSNSSVYIYIGFIYFTFHITNEQLNILKNILQMMLLSPKISLSVVIALSIVTILSYADNNTGILEVEIEALKAFKNSITLDPNGTLADWIEIHPHCNWSGIQCDPSSSHVISISLTSQQLHGEISPFLGNISSLQVLDLSSNSFTGHIPYQLSRCTQLTVLGLFENSLSGPIPPELGNLKRLQYLDLGSNFLNGTLPESIFNITSLLGIAFNNNNLTGTIPSHIGKLLNLIQMIGYGNSLVGSIPPSIGNLEALQALDFSQNQLSGVIPKEIGNLTNLQSLLLFQNSLSGKIPSELAKCKNLLNLELYENHLSGSIPPELGNLVHLETLRIFSNNLNSTIPPSIFQLKSLTHLGLSDNNLEGTISPEIGSLSSLTYLTLHLNKFTGRIPSSITSLKNLTYLSMSQNLLSGEIPSDIGVLHNLKFLILGFNHLHGSIPPSITSCTSLVNVSLAFNSFTGKIPEGFSRMPNLTFLSFAHNNLSGEIPDDLFNCSNLHTLSLGENNMSGVIKPGIQNLFKVQTLQLNVNSFIGSIPPEIGNLSQLITLTLAENKLSGSIPPELSKLFLLQGLSLHDNELEGTIPDTLSGIKPLTTLLLHRNKLVGQIPDSISQLDMLSYLDLHDNKLNGSIPRSMGKLSKLLMLDLSHNHLTGSIPSDVIAHFKDMQMYLNLSYNNFAGSVPYELGMLQMVQAIDISNNNLSGVIPNRISGCRNLFNLDFSGNKISGPIPAEAFSHMDLLENLNLSRNHLDGKIPEVLAQLEHLISIDLSQNNLKGTIPQGFANLSKLMHLNLSFNQLEGPVPMTGIFAHINASDMKGNQDLCGAKFLRPCKEGNNHALSKRSIAIIAALGSLAILLLLVLVILILNRGNKLCNSKQKENGENQEPDYRTALALKRFSPRELENATGLFSTDNIIGASNLSTVYKGQLEQGQIVAVKRLNLHQFYANTDKIFKTEASTLSQLRHRNLVKVLGYAWESGKLKALVLEYMENGNLDTIIHDKSVDQSRWTLSERIRVLISIASGLDYLHSGYDFPIVHCDLKPSNILLDRDWEAHVSDFGTARILGLHLQDGNTLSSSAALQGTIGYLAPEIAYIRKVTPKVDVFGFGIIVMEFLTKRRPTGLSEEDDGLPVSLPEAVEKAVANGMKELINIVDPMLAMDDTKGHVDALVGLFKLSLCCTLPNPEDRPNMNEVLSTLMKLQTAR 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05715 1220 Pfam Leucine rich repeat N-terminal domain 88 125 IPR013210 -
Arst3g05715 1220 ProSiteProfiles Protein kinase domain profile. 927 1216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05715 1220 SUPERFAMILY Protein kinase-like (PK-like) 905 1214 IPR011009 -
Arst3g05715 1220 Pfam Protein kinase domain 928 1146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05715 1220 SMART LRR_sd22_2 200 226 - -
Arst3g05715 1220 SMART LRR_sd22_2 416 439 - -
Arst3g05715 1220 SMART LRR_sd22_2 440 472 - -
Arst3g05715 1220 SMART LRR_sd22_2 272 298 - -
Arst3g05715 1220 SMART LRR_sd22_2 656 677 - -
Arst3g05715 1220 SMART LRR_sd22_2 779 805 - -
Arst3g05715 1220 SMART LRR_sd22_2 730 763 - -
Arst3g05715 1220 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 578 676 - -
Arst3g05715 1220 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 85 237 - -
Arst3g05715 1220 SUPERFAMILY L domain-like 583 844 - -
Arst3g05715 1220 Gene3D Phosphorylase Kinase; domain 1 888 1005 - -
Arst3g05715 1220 Pfam Leucine rich repeat 710 768 IPR001611 GO:0005515
Arst3g05715 1220 Pfam Leucine rich repeat 611 669 IPR001611 GO:0005515
Arst3g05715 1220 PRINTS Leucine-rich repeat signature 275 288 - -
Arst3g05715 1220 PRINTS Leucine-rich repeat signature 656 669 - -
Arst3g05715 1220 SMART LRR_typ_2 488 512 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 344 368 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 200 224 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 803 828 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 440 464 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 152 176 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 632 655 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 560 584 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 392 416 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 656 680 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 272 295 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 779 802 IPR003591 -
Arst3g05715 1220 SMART LRR_typ_2 296 320 IPR003591 -
Arst3g05715 1220 FunFam Leucine-rich repeat receptor protein kinase EMS1 459 547 - -
Arst3g05715 1220 Gene3D Ribonuclease Inhibitor 320 436 IPR032675 -
Arst3g05715 1220 Gene3D Ribonuclease Inhibitor 85 246 IPR032675 -
Arst3g05715 1220 SUPERFAMILY L domain-like 114 326 - -
Arst3g05715 1220 Gene3D Ribonuclease Inhibitor 85 246 IPR032675 -
Arst3g05715 1220 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 1006 1220 - -
Arst3g05715 1220 SUPERFAMILY RNI-like 278 666 - -
Arst3g05715 1220 CDD STKc_IRAK 933 1216 - -
Arst3g05715 1220 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 463 1214 - -
Arst3g05715 1220 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 677 853 - -
Arst3g05715 1220 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 463 1214 - -
Arst3g05715 1220 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 887 1005 - -
Arst3g05715 1220 Gene3D Ribonuclease Inhibitor 247 319 IPR032675 -
Arst3g05715 1220 Gene3D Transferase(Phosphotransferase) domain 1 1006 1219 - -
Arst3g05715 1220 SMART serkin_6 927 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05715 1220 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 238 458 - -
Arst3g05715 1220 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1052 1064 IPR008271 GO:0004672|GO:0006468
Arst3g05715 1220 Gene3D Ribonuclease Inhibitor 681 857 IPR032675 -
Arst3g05715 1220 Gene3D Ribonuclease Inhibitor 437 680 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05715 Arst-Chr3 130909773 130913857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05715 85 1217 Receptor kinase-like Gene Family AT5G46330 53.853 0.0 1126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst3g05715 Pkinase 2.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05715 K13420 - gmx:100817960 1700.26