Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05712 ATGCTAAGTCAAGGAGAAGAAACGGAGGGAGTAACAGTGACATGGGAGAATTTGTGGGTGACTGTTCCAAACGGAAAGAATACACTACCAATTCTGCAGGGCCTTACAGGCTATGCACAACCGGGGAGGCTTTTGGCTATAATGGGACCTTCAGGCTGTGGCAAAACCACACTTCTTGATGCCTTATCAGGAAGATTGAGCTCAAACATAAAGCAGAAAGGGAATATTCTAATAAATGGCCATAAACAAGAACTGGCTTATGGAATATCAGGATATGTAACACAAGACGATGCTTTGCTGTCAACTTTAACAGCTGGGGAAACTTTATACTACTCAGCACAGCTTCAATTTCCTGATTCCATGCCCATATCAGAGAAGAAGGAAAGAGCTGATGTAACTATCAGGGAAATGGGTCTGCAAAACGCCATTAACACAAGGGTTGGAGGCTGGAGTTCTAAGGGTCTCAGTGGGGGACAGAAAAGGAGACTCAGCATTTGCATTGAGATCTTAACACGCCCAAGACTCCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCGGCCTCCTATTATGTCATGAGAAGAATTGCTAACCTTGTTCAGAAAGATGGCATTCAAAGGACTGTTGTTGCATCAATTCATCAACCTAGCAGTGAAGTTTTTGAACTCTTCCATGACCTTTGTCTTCTGTCTTCTGGTGAAAATGTATATTTTGGTCCTGCTTCTGATGCTAATCAGTTTTTTGCTTTGAATGGTTTTCCTTGTCCGACACTCCATAATCCTTCTGATCATTACTTAAGGGTCATAAACAAAGATTTTGAACAGGAAGCTGAAGAAGGCTTTGGTAGCAGAGTAACTGCAGAGAAAGCTGATTTTGGTGCAGTAGAAAAGAAGAGGGACCATGCTGCGTTCCTGATTCAGTGCCTTGTTCTTATAAGAAGATCTGCACTGCATTATTTCCGCGACTTAAGCAATTACTGGCTGCGCCTTACTGTGTTTATTGCTATAGCTCTAAGCTTGGGCTCTATCTACTATGATATTGGCTTTGGTGTTGGATCTATTCAGGCCAGAGGATCTCTGCTTGCTTTCTTAAGTTGTCTTTTGTCTTTCATGACACTCGTTGGTGGATTTGCTCCGCTACTAGAGGAAATCAAGGTATTTGAAAGAGAGAGATTGAATGGACACTATGATGTTACAGCATTTCTCATAGGGAACACATTTTCTGCTGTTCCATACATGCTACTAGTAACTCTGGCTCCGGGACTAATATCCTATTACCTTTGTGGACTGCAAAAAGGACCAGAACACTTGGTATACTTTGTATCAGTGCTATTTGCCATAGTTATGTGGGTTGAGAGCCTCATGCTTGTTGTGGGAAGTGTCTCCCCTAACTTTGTTATAGGCATGTTGATTTCTGGTGGAATTCAAGGAATCATGACCCTAGTTGGTGGATTCTATAGGTTACCAAATGATCTTCCAAAACCCTTATGGAAATACCCTCTGTATTATGTGTCTTTTCAAAAGTATGGACTCCAAGGATTATTCAAGAATGAATTTCAAGGCTTAACATTTATGATGGGCCAAGATGGAGGTGCTAAGAATAACATAAACATTAGTGGTGGGGAAATTCTAATAAAGACATGGCACGTGGAAATGGGACATTCTAAGTGGGTTGATCTTGGAATCTTTTTTGTAATGATTGTTGTGTATAGAATGCTGTTCTTGGCAATCACTAAGAGCAAGGTGAAGTTGAGGCCTGCATCTATTTGCTGCTTTCACTAG 1785 0.414 MLSQGEETEGVTVTWENLWVTVPNGKNTLPILQGLTGYAQPGRLLAIMGPSGCGKTTLLDALSGRLSSNIKQKGNILINGHKQELAYGISGYVTQDDALLSTLTAGETLYYSAQLQFPDSMPISEKKERADVTIREMGLQNAINTRVGGWSSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIANLVQKDGIQRTVVASIHQPSSEVFELFHDLCLLSSGENVYFGPASDANQFFALNGFPCPTLHNPSDHYLRVINKDFEQEAEEGFGSRVTAEKADFGAVEKKRDHAAFLIQCLVLIRRSALHYFRDLSNYWLRLTVFIAIALSLGSIYYDIGFGVGSIQARGSLLAFLSCLLSFMTLVGGFAPLLEEIKVFERERLNGHYDVTAFLIGNTFSAVPYMLLVTLAPGLISYYLCGLQKGPEHLVYFVSVLFAIVMWVESLMLVVGSVSPNFVIGMLISGGIQGIMTLVGGFYRLPNDLPKPLWKYPLYYVSFQKYGLQGLFKNEFQGLTFMMGQDGGAKNNINISGGEILIKTWHVEMGHSKWVDLGIFFVMIVVYRMLFLAITKSKVKLRPASICCFH 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05712 594 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524|GO:0016887
Arst3g05712 594 SMART AAA_5 41 234 IPR003593 GO:0016887
Arst3g05712 594 FunFam ABC transporter G family member 11 11 297 - -
Arst3g05712 594 CDD ABCG_EPDR 10 240 - -
Arst3g05712 594 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 258 IPR003439 GO:0005524
Arst3g05712 594 Pfam ABC-2 type transporter 215 277 IPR043926 GO:0140359
Arst3g05712 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 251 IPR027417 -
Arst3g05712 594 Gene3D - 11 308 IPR027417 -
Arst3g05712 594 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 9 277 - -
Arst3g05712 594 Pfam ABC-2 type transporter 308 520 IPR013525 GO:0016020|GO:0140359
Arst3g05712 594 Pfam ABC transporter 33 183 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05712 Arst-Chr3 130877027 130880011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05712 5 219 Calmodulin-binding Proteins AT2G36910 28.139 4.13e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05712 K05681 - gmx:100792425 896.73