Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05680 ATGTTGAATAGTTCAACGCTGCAAGACATTGAGATTGGGTCAAGCAACTTATCTGGGACCCTACCATCAAACTTATGTGGTGGACTTGCAAGAATCCAAGTGCTTTACATAGCTTTCAACCTGCTTTCTGGTAAACTGCCTTCGGTTTGGCACCACTGCAAAGAGTTGACCGATGTTGACTTATCAAACAACAAGTTCAGCCAAGGGAACATACCCCGTGATATTGGAAACTTAACTATGCTTGCTTCCTTGTATCTTAATCAAGCCAACTTACAAGGAGAAATTCCACCCTCTCTTTTTAACATATCTTCAATGAGAGTACTCAACCTTGGACAAAACAAATTGAATGGTAGCCTCACAGAAGAGATGTTTCTTCAGCTTCCTTTACTAGAATACATTTATCTGGTAGATAATCAATTTGTTGGAAGTATTCCAAAAACAATAAGCAACTGCACCATGCTCCAAGAGTTACATTTGGGAAGCAACTACTTCACAGGTTCTATACCAGAGGGCATTGGAGATCTTCTACTCACAAGCTTAAGCATGGGAAATAACCATTTAAGTGGATCAATTCCCTCAAATATCTTCAACATGTCTTCACTGAGTTACTTATATCTAGCAAATAATTCCCTCTCAGGTTCTCTTCCATCACATATCAGCCTTGAAAACATGGAAGAGCTAAACTTGTATGGAAACAAACTTAGTGGAAATATTCCAAGTAGCATATCCAATGCTACAAAGCTTAACTACATGGACTTGAAGTTAAATAAATTCAGTGGAGTTATCCCAAATACTATTGGGAATTTGAGAAATCTTCAGCAGCTTGATTTAGGATACAATAATTTAACCACTCATTCTTCCACTCTTGAATTAATGTATCCTTCTTCCTTGTGCGATCTTTACATATCAGGGAATCCATTCCATGCAAAGCTTCCCAAGTCAATAGGAAATATGTCCAATTTGGAACTATTTGATGCTGATGCTTGCAGTATTGATGGTGAAATCCCTTTGGAAATTGGAAACTTAACCAATTTGTACGCGCTAAGTTTGTACCAGAATGATTTAAGTGGAACCATTCCAACTACAATTAAAGGTTTGCAGTCTCTTCAATATTTGAATCTTGGCAACAACCGTCTGCAGGGAACCATCATCAGCGAAATCTGCAAAATCAAGCAGCTGAGTGAGTTGTACATAACTGAGAACAAGCTAATTTCTGGAGAGGTTCCAACTTGCTTTGGTAATCTTACTTCTCTAAGAAAACTTTACTTGAACTCCAACAAACTCAGTAAGGTGCCTTCTTCTCTTTGGAGCCTCAGAGACATTCTTGTGGTGAACTTGTCTGACAATGCTTTAACTCTATCTCTTCCAATTGAAATTGGGAACTTAAAGGCTGTGACTTTCTTGGATCTATCAAAGAATATGATCTCAGGAAGCATTCCTGGGGCCATTTCTGGATTGCAAAATTTGCAAATTCTCAACTTATCACAAAATAAATTGGTAGGTGGTATTCCTGATTCACTTGGCAGTTTGATAAGTTTGACAGATTTGGACTTATCTCAAAACAACTTGTTTGGCTTGATTCCAAGATCATTGGAGTCACTTCATTATCTTGAATTCATCAATCTTTCTCATAATAGTTTGGAAGGAGAGATTCCGAGTGGTGGACCTTTCGAAAATTTCACTGCTCAATCTTTCATGTTTAATAAAGCACTTTGTGGAAATGCCAGATTACAAGTCCCAGCATGCAGTAAAGTAAAGAAGAAAGGGTCAAATGCAAACATATTCTTCATCAAATGCATATTGCCTATAATGGTTTCAATCATTCTGGTTGTTTTCTGTGTGTTTTTTCTCGTCAGGCGTCGAAGAAAGAATGGTGGTGATACTAACGAAGGAACATTATCAGCATTACCAGCAGCCAGAATGATTTCGTACTATGAACTATCACAGGCAACTAATGGATTTGATGAGAGTAATTTGCTTGGTAGGGGCAGTTTTGGCTCTGTGTTCAAAGGTTTACTTTCAAATGGGATGGTGGTTGCTGTCAAAGTGTTTAACTTGGACTTGGAATTAGGATCAAAGAGCTTCAGTGTAGAATGCGAAGCAATGCGCAATCTGCGCCATCGAAATCTCATCAAGATCATAGATTGTTGTTCAAGTATAGATTACAAGCTTTTAATGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTCATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGCCCATGTCAGTGACTTTGGCATTGCCAAATTGCTTGGAGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTACCCCATGCAATTGATCGAGTTGTGGATTCCAACTTGTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACTGGCCTTGAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGACAGATATTGCTGCATCATTGAACAAAGTTAAGGCCATGTTTCTTAAAGCTAGTGACAAGGATGTCGTGCGGTTTTGTAGAAAATGA 2847 0.385 MLNSSTLQDIEIGSSNLSGTLPSNLCGGLARIQVLYIAFNLLSGKLPSVWHHCKELTDVDLSNNKFSQGNIPRDIGNLTMLASLYLNQANLQGEIPPSLFNISSMRVLNLGQNKLNGSLTEEMFLQLPLLEYIYLVDNQFVGSIPKTISNCTMLQELHLGSNYFTGSIPEGIGDLLLTSLSMGNNHLSGSIPSNIFNMSSLSYLYLANNSLSGSLPSHISLENMEELNLYGNKLSGNIPSSISNATKLNYMDLKLNKFSGVIPNTIGNLRNLQQLDLGYNNLTTHSSTLELMYPSSLCDLYISGNPFHAKLPKSIGNMSNLELFDADACSIDGEIPLEIGNLTNLYALSLYQNDLSGTIPTTIKGLQSLQYLNLGNNRLQGTIISEICKIKQLSELYITENKLISGEVPTCFGNLTSLRKLYLNSNKLSKVPSSLWSLRDILVVNLSDNALTLSLPIEIGNLKAVTFLDLSKNMISGSIPGAISGLQNLQILNLSQNKLVGGIPDSLGSLISLTDLDLSQNNLFGLIPRSLESLHYLEFINLSHNSLEGEIPSGGPFENFTAQSFMFNKALCGNARLQVPACSKVKKKGSNANIFFIKCILPIMVSIILVVFCVFFLVRRRRKNGGDTNEGTLSALPAARMISYYELSQATNGFDESNLLGRGSFGSVFKGLLSNGMVVAVKVFNLDLELGSKSFSVECEAMRNLRHRNLIKIIDCCSSIDYKLLMMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALEYLHHGSSPIVVHCDVKPCNVLLDEDMVAHVSDFGIAKLLGEGQSKEYTKTMATVGYIAPEFGSKGIISTKGDVYSFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLPHAIDRVVDSNLLQDEGHHHVDDIIASTSSILKLALNCCEDLPEERMNMTDIAASLNKVKAMFLKASDKDVVRFCRK 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05680 948 Pfam Protein kinase domain 655 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05680 948 Pfam Leucine rich repeat 81 140 IPR001611 GO:0005515
Arst3g05680 948 Pfam Leucine rich repeat 223 282 IPR001611 GO:0005515
Arst3g05680 948 Pfam Leucine rich repeat 344 403 IPR001611 GO:0005515
Arst3g05680 948 SUPERFAMILY Protein kinase-like (PK-like) 635 927 IPR011009 -
Arst3g05680 948 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 177 928 - -
Arst3g05680 948 ProSitePatterns Protein kinases ATP-binding region signature. 660 682 IPR017441 GO:0005524
Arst3g05680 948 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 291 586 - -
Arst3g05680 948 SMART serkin_6 654 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05680 948 Gene3D Transferase(Phosphotransferase) domain 1 730 944 - -
Arst3g05680 948 SUPERFAMILY RNI-like 179 553 - -
Arst3g05680 948 Gene3D Ribonuclease Inhibitor 126 287 IPR032675 -
Arst3g05680 948 Gene3D Ribonuclease Inhibitor 1 125 IPR032675 -
Arst3g05680 948 ProSiteProfiles Leucine-rich repeat profile. 271 292 IPR001611 GO:0005515
Arst3g05680 948 SMART LRR_typ_2 486 509 IPR003591 -
Arst3g05680 948 SMART LRR_typ_2 269 292 IPR003591 -
Arst3g05680 948 SMART LRR_typ_2 177 198 IPR003591 -
Arst3g05680 948 SMART LRR_typ_2 415 438 IPR003591 -
Arst3g05680 948 SMART LRR_typ_2 510 533 IPR003591 -
Arst3g05680 948 SMART LRR_typ_2 221 245 IPR003591 -
Arst3g05680 948 SMART LRR_typ_2 102 126 IPR003591 -
Arst3g05680 948 SMART LRR_typ_2 366 390 IPR003591 -
Arst3g05680 948 SMART LRR_typ_2 127 151 IPR003591 -
Arst3g05680 948 SMART LRR_typ_2 462 485 IPR003591 -
Arst3g05680 948 FunFam Serine-threonine protein kinase plant-type 635 729 - -
Arst3g05680 948 Gene3D Ribonuclease Inhibitor 288 590 IPR032675 -
Arst3g05680 948 FunFam Receptor-like protein kinase 7 51 290 - -
Arst3g05680 948 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 730 940 - -
Arst3g05680 948 ProSiteProfiles Leucine-rich repeat profile. 417 438 IPR001611 GO:0005515
Arst3g05680 948 SUPERFAMILY RNI-like 3 219 - -
Arst3g05680 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Arst3g05680 948 Pfam Leucine Rich Repeat 488 510 IPR001611 GO:0005515
Arst3g05680 948 Pfam Leucine Rich Repeat 512 534 IPR001611 GO:0005515
Arst3g05680 948 ProSiteProfiles Protein kinase domain profile. 654 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05680 948 Gene3D Phosphorylase Kinase; domain 1 636 729 - -
Arst3g05680 948 SMART LRR_sd22_2 510 536 - -
Arst3g05680 948 SMART LRR_sd22_2 342 368 - -
Arst3g05680 948 SMART LRR_sd22_2 269 291 - -
Arst3g05680 948 SMART LRR_sd22_2 462 488 - -
Arst3g05680 948 SMART LRR_sd22_2 415 437 - -
Arst3g05680 948 SMART LRR_sd22_2 221 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05680 Arst-Chr3 130665005 130669888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05680 56 938 Receptor kinase-like Gene Family AT3G47570 38.436 4.73e-173 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst3g05680 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05680 - K13420 gmx:100784397 1334.7