Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05678 ATGTTGAATAGTTCAACGCTGCAAGACATTGAGATTGGGTCAAGCAACTTATCTGGGACCCTACCATCAAACTTATGTGGTGGACTTGCAAGAATCCAAGTGCTTTACATAGCTTTCAACCTGCTTTCTGGTAAACTGCCTTCGGTTTGGCACCACTGCAAAGAGTTGACCGATGTTGACTTATCAAACAACAAGTTCAGCCAAGGGAACATACCCCGTGATATTGGAAACTTAACTATGCTTGCTTCCTTGTATCTTAATCAAGCCAACTTACAAGGAGAAATTCCACCCTCTCTTTTTAACATATCTTCAATGAGAGTACTCAACCTTGGACAAAACAAATTGAATGGTAGCCTCACAGAAGAGATGTTTCTTCAGCTTCCTTTACTAGAATACATTTATCTGGTAGATAATCAATTTGTTGGAAGTATTCCAAAAACAATAAGCAACTGCACCATGCTCCAAGAGTTACATTTGGGAAGCAACTACTTCACAGGTTCTATACCAGAGGGCATTGGAGATCTTCTACTCACAAGCTTAAGCATGGGAAATAACCATTTAAGTGGATCAATTCCCTCAAATATCTTCAACATGTCTTCACTGAGTTACTTATATCTAGCAAATAATTCCCTCTCAGGGAATCCATTCCATGCAAAGCTTCCCAAGTCAATAGGAAATATGTCCAATTTGGAACTATTTGATGCTGATGCTTGCAGTATTGATGGTGAAATCCCTTTGGAAATTGGAAACTTAACCAATTTGTACGCGCTAAGTTTGTACCAGAATGATTTAAGTGGAACCATTCCAACTACAATTAAAGGTTTGCAGTCTCTTCAATATTTGAATCTTGGCAACAACCGTCTGCAGGGAACCATCATCAGCGAAATCTGCAAAATCAAGCAGCTGAGTGAGTTGTACATAACTGAGAACAAGCTAATTTCTGGAGAGGTTCCAACTTGCTTTGGTAATCTTACTTCTCTAAGAAAACTTTACTTGAACTCCAACAAACTCAGTAAGGTGCCTTCTTCTCTTTGGAGCCTCAGAGACATTCTTGTGGTGAACTTGTCTGACAATGCTTTAACTCTATCTCTTCCAATTGAAATTGGGAACTTAAAGGCTGTGACTTTCTTGGATCTATCAAAGAATATGATCTCAGGAAGCATTCCTGGGGCCATTTCTGGATTGCAAAATTTGCAAATTCTCAACTTATCACAAAATAAATTGGTAGGTGGTATTCCTGATTCACTTGGCAGTTTGATAAGTTTGACAGATTTGGACTTATCTCAAAACAACTTGTTTGGCTTGATTCCAAGATCATTGGAGTCACTTCATTATCTTGAATTCATCAATCTTTCTCATAATAGTTTGGAAGGAGAGATTCCGAGTGGTGGACCTTTCGAAAATTTCACTGCTCAATCTTTCATGTTTAATAAAGCACTTTGTGGAAATGCCAGATTACAAGTCCCAGCATGCAGTAAAGTAAAGAAGAAAGGGTCAAATGCAAACATATTCTTCATCAAATGCATATTGCCTATAATGGTTTCAATCATTCTGGTTGTTTTCTGTGTGTTTTTTCTCGTCAGGCGTCGAAGAAAGAATGGTGGTGATACTAACGAAGGAACATTATCAGCATTACCAGCAGCCAGAATGATTTCGTACTATGAACTATCACAGGCAACTAATGGATTTGATGAGAGTAATTTGCTTGGTAGGGGCAGTTTTGGCTCTGTGTTCAAAGGTTTACTTTCAAATGGGATGGTGGTTGCTGTCAAAGTGTTTAACTTGGACTTGGAATTAGGATCAAAGAGCTTCAGTGTAGAATGCGAAGCAATGCGCAATCTGCGCCATCGAAATCTCATCAAGATCATAGATTGTTGTTCAAGTATAGATTACAAGCTTTTAATGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTCATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGCCCATGTCAGTGACTTTGGCATTGCCAAATTGCTTGGAGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTACCCCATGCAATTGATCGAGTTGTGGATTCCAACTTGTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACTGGCCTTGAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGACAGATATTGCTGCATCATTGAACAAAGTTAAGGCCATGTTTCTTAAAGCTAGTGACAAGGATGTCGTGCGGTTTTGTAGAAAATGA 2574 0.3893 MLNSSTLQDIEIGSSNLSGTLPSNLCGGLARIQVLYIAFNLLSGKLPSVWHHCKELTDVDLSNNKFSQGNIPRDIGNLTMLASLYLNQANLQGEIPPSLFNISSMRVLNLGQNKLNGSLTEEMFLQLPLLEYIYLVDNQFVGSIPKTISNCTMLQELHLGSNYFTGSIPEGIGDLLLTSLSMGNNHLSGSIPSNIFNMSSLSYLYLANNSLSGNPFHAKLPKSIGNMSNLELFDADACSIDGEIPLEIGNLTNLYALSLYQNDLSGTIPTTIKGLQSLQYLNLGNNRLQGTIISEICKIKQLSELYITENKLISGEVPTCFGNLTSLRKLYLNSNKLSKVPSSLWSLRDILVVNLSDNALTLSLPIEIGNLKAVTFLDLSKNMISGSIPGAISGLQNLQILNLSQNKLVGGIPDSLGSLISLTDLDLSQNNLFGLIPRSLESLHYLEFINLSHNSLEGEIPSGGPFENFTAQSFMFNKALCGNARLQVPACSKVKKKGSNANIFFIKCILPIMVSIILVVFCVFFLVRRRRKNGGDTNEGTLSALPAARMISYYELSQATNGFDESNLLGRGSFGSVFKGLLSNGMVVAVKVFNLDLELGSKSFSVECEAMRNLRHRNLIKIIDCCSSIDYKLLMMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALEYLHHGSSPIVVHCDVKPCNVLLDEDMVAHVSDFGIAKLLGEGQSKEYTKTMATVGYIAPEFGSKGIISTKGDVYSFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLPHAIDRVVDSNLLQDEGHHHVDDIIASTSSILKLALNCCEDLPEERMNMTDIAASLNKVKAMFLKASDKDVVRFCRK 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05678 857 SUPERFAMILY Protein kinase-like (PK-like) 544 836 IPR011009 -
Arst3g05678 857 Pfam Leucine Rich Repeat 421 443 IPR001611 GO:0005515
Arst3g05678 857 Gene3D Phosphorylase Kinase; domain 1 545 638 - -
Arst3g05678 857 SUPERFAMILY L domain-like 4 214 - -
Arst3g05678 857 SUPERFAMILY L domain-like 177 483 - -
Arst3g05678 857 FunFam Serine-threonine protein kinase plant-type 544 638 - -
Arst3g05678 857 Gene3D Ribonuclease Inhibitor 1 212 IPR032675 -
Arst3g05678 857 Gene3D Ribonuclease Inhibitor 213 499 IPR032675 -
Arst3g05678 857 ProSitePatterns Protein kinases ATP-binding region signature. 569 591 IPR017441 GO:0005524
Arst3g05678 857 ProSiteProfiles Leucine-rich repeat profile. 326 347 IPR001611 GO:0005515
Arst3g05678 857 ProSiteProfiles Protein kinase domain profile. 563 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05678 857 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 212 - -
Arst3g05678 857 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 213 495 - -
Arst3g05678 857 Pfam Protein kinase domain 564 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05678 857 PANTHER OS04G0122200 PROTEIN 210 844 - -
Arst3g05678 857 SMART LRR_typ_2 395 418 IPR003591 -
Arst3g05678 857 SMART LRR_typ_2 324 347 IPR003591 -
Arst3g05678 857 SMART LRR_typ_2 198 227 IPR003591 -
Arst3g05678 857 SMART LRR_typ_2 102 126 IPR003591 -
Arst3g05678 857 SMART LRR_typ_2 275 299 IPR003591 -
Arst3g05678 857 SMART LRR_typ_2 419 442 IPR003591 -
Arst3g05678 857 SMART LRR_typ_2 371 394 IPR003591 -
Arst3g05678 857 SMART LRR_typ_2 127 151 IPR003591 -
Arst3g05678 857 SMART LRR_sd22_2 419 445 - -
Arst3g05678 857 SMART LRR_sd22_2 251 277 - -
Arst3g05678 857 SMART LRR_sd22_2 371 397 - -
Arst3g05678 857 SMART LRR_sd22_2 324 346 - -
Arst3g05678 857 SMART LRR_sd22_2 198 229 - -
Arst3g05678 857 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 639 849 - -
Arst3g05678 857 Pfam Leucine rich repeat 81 140 IPR001611 GO:0005515
Arst3g05678 857 Pfam Leucine rich repeat 370 408 IPR001611 GO:0005515
Arst3g05678 857 Pfam Leucine rich repeat 253 312 IPR001611 GO:0005515
Arst3g05678 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Arst3g05678 857 Gene3D Transferase(Phosphotransferase) domain 1 639 853 - -
Arst3g05678 857 SMART serkin_6 563 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05678 Arst-Chr3 130665005 130669911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05678 1 847 Receptor kinase-like Gene Family AT3G47570 38.165 4.58e-168 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst3g05678 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05678 - K13420 gmx:100784397 1041.95