Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05656 ATGTCTGATGAAGCTAAACAACTTCTCTACCAAGACCTTATTCTAGATCATCATCAGAATCAGAATATTATTGCAGGAGGAGGAAGATTATCCAACAACATGTTCTGTGAGAAGCAGTTTCCATCATCATCATCATCATCATCACAAGTAGCGTTTGATCCATCTTCATACATGAGCTTCACTGAATGCCTTCAAGGAGGGATGGACTATAACTCGCTTGCAACTTCTTTTGGTTTGTCTCCTTCTTCATCGGAGGTCTTTTCATCCATCGAAGGCAACAATAACAATCAAAAGCCCGAAGGTGATGTATTAGGAACTGGTGGTGGTGGTGGTGGAGGTAGTGAAACCCTTGCAACCCTGAACTCATCGATCTCTTCGTCATCATCTGAAGCCGGGGGCGAAGAAGATTCTGGAAAGAGCAACAAAGATAGCCAGGTCAAAGAAGAAGCAGCAGGAGAAACCTCTAAGAAGGGGAACAAGGAGAATAATAATAACAAGAAGAAAGGGGAGAAGAAGCAGAAGGAGCCAAGGTTTGCGTTCATGACAAAGAGCGAGGTTGATCATCTTGAAGATGGATACCGATGGAGAAAATACGGACAGAAAGCCGTTAAGAATAGCCCTTATCCAAGATGCACGACACAGAAGTGCAGTGTGAAGAAACGTGTGGAGAGGTGTTATCGGGATCCAACGACTGTGATAACAACCTATGAAGGTCAACACAACCATCCAGTCCCCACTTCTTTGAGAGGGAATGCGGCTTCAATGTTCACACCTTCCATGCTCTCCATCTCCGCCCCCACTCCCCTCCTCTCATCCGCCGGACATCACGACCTCGCCCTTTTTGCTCCTCTCTCTCACCACCACAACCAATATTCCGCTGCTTCTGGATCACAATCGTCCTTATTGTTTCATCACCATCAGAGTATTAACAACAACGTTAATAACAACAATATTAATAATAATAATAATAACTCTCTTCTTCTTCTCAATCATCATCATCATCCGTATAATAATCAGCAGCTTCCTCCTGAATATGGCCTCCTTCAAGACATGCTCCCTTCCATGTTCCTCAAGCAAGAGCCATGA 1086 0.442 MSDEAKQLLYQDLILDHHQNQNIIAGGGRLSNNMFCEKQFPSSSSSSSQVAFDPSSYMSFTECLQGGMDYNSLATSFGLSPSSSEVFSSIEGNNNNQKPEGDVLGTGGGGGGGSETLATLNSSISSSSSEAGGEEDSGKSNKDSQVKEEAAGETSKKGNKENNNNKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRCTTQKCSVKKRVERCYRDPTTVITTYEGQHNHPVPTSLRGNAASMFTPSMLSISAPTPLLSSAGHHDLALFAPLSHHHNQYSAASGSQSSLLFHHHQSINNNVNNNNINNNNNNSLLLLNHHHHPYNNQQLPPEYGLLQDMLPSMFLKQEP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05656 361 Gene3D WRKY domain 173 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g05656 361 MobiDBLite consensus disorder prediction 135 178 - -
Arst3g05656 361 FunFam WRKY transcription factor 57 175 245 - -
Arst3g05656 361 MobiDBLite consensus disorder prediction 81 101 - -
Arst3g05656 361 MobiDBLite consensus disorder prediction 115 134 - -
Arst3g05656 361 Pfam WRKY DNA -binding domain 190 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g05656 361 ProSiteProfiles WRKY domain profile. 184 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g05656 361 SMART WRKY_cls 189 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g05656 361 MobiDBLite consensus disorder prediction 81 178 - -
Arst3g05656 361 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 307 IPR044810 GO:0003700
Arst3g05656 361 SUPERFAMILY WRKY DNA-binding domain 181 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05656 Arst-Chr3 130524514 130526058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05656 40 361 WRKY Transcription Factor Family AT4G18170 45.858 8.01e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst3g05656 WRKY 8.4e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05656 - - gmx:100787050 338.191