Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05648 ATGGCAGCCTCCACCATGGCTCTCTCCTCCCCATCATTGGCTGGCAAGGCCGTCAAGCTCAGCCCATCAGTCCCTGAGCTTGGAGTTGGAAGAATCTCCATGAGGAAAACCGCCACCAAGCAAGCCACCTCAGGAAGCCCATGGTACGGTCCAGACCGTGTTAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCGTCCTACCTCACTGGTGAGTTCCCAGGTGACTACGGCTGGGACACTGCTGGGCTTTCCGCTGACCCAGAGACCTTTGCCAGGAACCGTGAGCTCGAAGTGATCCACAGCAGGTGGGCCATGCTTGGGGCTTTGGGCTGTGTCTTCCCAGAGCTTTTGGCCCGCAACGGTGTCAAATTCGGAGAGGCTGTGTGGTTCAAGGCTGGATCACAGATCTTCAGCGAGGGTGGGCTTGACTACTTGGGAAACCCAAGCCTGATCCACGCACAGAGCATCTTGGCCATTTGGGCCACCCAGGTCATCTTGATGGGAGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTTGGAGAGGTTACTGACCCACTTTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGACGACCCAGAGGCTTTCGCCGAGCTCAAGGTCAAGGAGATTAAGAACGGTAGGTTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAGGCTATTGTCACTGGTAAAGGCCCATTGGAGAACCTCGCTGACCACCTTGCTGACCCAGTCAACAACAACGCCTGGGCCTATGCCACCAACTTTGTCCCCGGAAAGTGA 795 0.5686 MAASTMALSSPSLAGKAVKLSPSVPELGVGRISMRKTATKQATSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05648 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Arst3g05648 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Arst3g05648 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Arst3g05648 264 FunFam Chlorophyll a-b binding protein, chloroplastic 55 257 - -
Arst3g05648 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05648 Arst-Chr3 130487563 130488607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05648 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 89.850 2.74e-175 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05648 K08912 - qsu:112030611 524.242