Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05638 ATGGCTACCATTTCTGCAACGTGCTTCCTCTATATTCTATCATGGTTATGGTTATGCACCATGACACTATGTGGAACAGTGTTAGAAGACCTAAAAAACTTGCATCCACCTCCAGAATTTAACTCCACAATCATGACAAACTGTCTCAATAACCCTTCGCTTAGGTACTGCAGTTCCACTCCCATGAACTTTGATGAAATATTCAAATACACCATTGTTGCTAGCCATCTCTGCAATGAATCAAAGAACCCCATTTGCATAGAATCCTTCCCCAAAGTTGATCTTAGAAACCGTCCAAACATTGCACCTCTTTACTTGTCATTTGAATTCTTCTGGAGGTATTGCCCCCTAACCATTGTTTCCATTGATGTGTCAAACAACTCTTTGAAGGGGAATTTTCCTATTGATGTTCTTCATTGCACTCAAATCCATGCTCTTGATTTAAGCATTAATGAGTTTTCTGGTGATATTCCGATTCAGAGTTTCTCTCCTCTCACCAACCTTACTTTCCTTAACCTATCCTATAACTGCTTCTCTGAGAGTGAAGAACTATCTGATTCACAGTTCTTCAAAAGGTTTAATTCTTCAAGTTTTCTTCATTCTGGTGCACTCTTGGATCACAGAAGGTTCTTCACATTGAAGGTTGTGATCTTATTGGTTGGTTTTCCCATCCTTGTCATTCTGATTGTGATATTCTTAGCATGGGTTTGTTTTCAAAGGCCTGATTTTCTTCCGAGAAAACTTCAAAGAAGAAGGACCTTCACACCTGCAATTCTAAACGCGGCTACATCTGGTTTTTCAAGCAGGAATTTAGTAGGGAAGAGTGATGTTGTTCACATCTACAAAGGGGTCTTGAGAGACGGCACACAAGTGAAAATTGAGATGTATTGGGATGAGATATCAAGGGAGAGATATCGTAAATTTGTTGAAGAATGCAAGGTGCTCTCTGAGTTAGACCACAAGAACCTTGTTAGGGTTCTAGGGTGGTGTAAGAGCAGAAAATTCAGGGCTGTTATCACAGAATGGACAAGAAAGGAGAATGTTGAAATGTGGTTATTATCAGAGTCTGCTCCACCACCATGGAGTCATAGAGTCAAAGTGTTAATGGGAGTTGTAGAATGCATGCAGTATCTGCAGGAGGAATGGCCTCAAGTTGACTATGATCTCAACACAAGTAGTGTGCTATTGACTCAAGATTTGGAACCATTAATTTCAAGGTTCAAAGTTGTAGATCATAACATTAGTACTACAAGAAATATATGCAAGTTTGGTGTATTCATGCTGGAAGTGATACTAAATAGGAAGGTTCAAGAGGAGTTTGAAGGGGATGCAAGTGGGTTCATTAAGTATATGAGAAGTGTTGATCATGAAGAGTTGCAACAGATGATTGATGAGAGAATGGAACTAGGTGAGACTAGTTTTCATCAAGTTAAACAGGCTGTATCCCTTGGATTAATGTGCATAGACCAATCAAACAGTGAGCAACCGAGCTTGGCCTTCATATCTAATAGCATTGCCAGAGCCTACAAGGCTACCCTTGTTTTGCCATCTGCAAATCATACAATAACAAGATCCCATGGAGGCCATAGATTTAAGGGACACAAGACATAA 1611 0.3966 MATISATCFLYILSWLWLCTMTLCGTVLEDLKNLHPPPEFNSTIMTNCLNNPSLRYCSSTPMNFDEIFKYTIVASHLCNESKNPICIESFPKVDLRNRPNIAPLYLSFEFFWRYCPLTIVSIDVSNNSLKGNFPIDVLHCTQIHALDLSINEFSGDIPIQSFSPLTNLTFLNLSYNCFSESEELSDSQFFKRFNSSSFLHSGALLDHRRFFTLKVVILLVGFPILVILIVIFLAWVCFQRPDFLPRKLQRRRTFTPAILNAATSGFSSRNLVGKSDVVHIYKGVLRDGTQVKIEMYWDEISRERYRKFVEECKVLSELDHKNLVRVLGWCKSRKFRAVITEWTRKENVEMWLLSESAPPPWSHRVKVLMGVVECMQYLQEEWPQVDYDLNTSSVLLTQDLEPLISRFKVVDHNISTTRNICKFGVFMLEVILNRKVQEEFEGDASGFIKYMRSVDHEELQQMIDERMELGETSFHQVKQAVSLGLMCIDQSNSEQPSLAFISNSIARAYKATLVLPSANHTITRSHGGHRFKGHKT 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05638 536 ProSiteProfiles Protein kinase domain profile. 266 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05638 536 SUPERFAMILY L domain-like 119 203 - -
Arst3g05638 536 Gene3D Ribonuclease Inhibitor 73 192 IPR032675 -
Arst3g05638 536 Gene3D Transferase(Phosphotransferase) domain 1 246 525 - -
Arst3g05638 536 ProSiteProfiles Leucine-rich repeat profile. 167 188 IPR001611 GO:0005515
Arst3g05638 536 Pfam Protein tyrosine and serine/threonine kinase 272 408 IPR001245 GO:0004672|GO:0006468
Arst3g05638 536 SUPERFAMILY Protein kinase-like (PK-like) 246 503 IPR011009 -
Arst3g05638 536 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 118 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05638 Arst-Chr3 130412377 130414122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05638 242 519 Receptor kinase-like Gene Family AT3G55550 23.418 5.03e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Arst3g05638 PK_Tyr_Ser-Thr 5.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05638 - - ahf:112771647 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05638 3 130412377 130414122 Arst3g05638 3 130412377 130414122 ECH