Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05624 ATGTCTTCTAAAGGAAAAGAACCCCAAAACATGATGGATATTGATCTCTCTTTGAAGATAGATCATATTGAAAATAATAAAGACGGAGAAGCAACACCACCAAAAGTAGTAGCATCAGTCAAAGAGGATCTGAAGAACAAGAAGAAGGAAGAAACAAAGGCACTTAATATTAACAAAGAAGATTTTCTTGAAGCCGCAGCTGGCGAAATTGAAGATGAATTACCTTCGCAGGATAACACAAAAGCAAGAGAGTTGAGTGTGTTACAAATGGAGATGGAGAGCATGAAAGAGGAAAACAAAGTGCTGAGGAAAGTGGTGGAACAAACTATGAAAGACTACTATGATCTGCAACTCAAATTTTCAATCATCCAAGAAAACAACAATAATAAAAATAAAAGCAAGGATCATGAAATTTCTCTCTCACTTCATCGAGAAGAGAATGCAACGATAAGGAAGCTCCATGATGAAGAAGGGCCGCGGAGAATTCATCATTATCAAGATGAGATGTTTAAGTTTAACAACAAAATTGAAAAAGCCTCATCCCTTGCAAACACCGATTGCGGTGAGAGTTTAATAAGCGAGAGTGAATTGGGCTTATCGCTAAGGTTGGAGACAAGCACAAGAAAAAAGGAAAAGGAAATTGATGACGAAGAAGATCAAAAGCAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAGGAGAAAAAGACGCAACCTGCAAATTTTGCATCGTCGTCAGCGGCTACGAAATTGCAGCGGACACATCATCATGCGTTCCACGCTGCATCGCCTCCTAACAGAAAAGCTAGGGTTTCGGTTAGAGCAAGATGCGAGGCAGCCACCATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAGATTGCTAAAGGAAATCCATGTCCACGAGCTTACTATCGTTGCACTGTAGCCCCTGGCTGCCCCGTTAGAAAACAGGTACAGAGATGCATAGATGACATGTCGATACTAATCACAACATACGAAGGAACGCACAACCATCCACTTCCGGTGGGTGCAACTGCCATGGCTTCTTCGGCCGCAGCTTCCTTCATGTTGCTGGACTCAAGCACTTTCAACGTTAACCACCAGCAGCCATTACTACTAAACCCAAACCCTAATAATAAAGGAGTTGTTCTGGACCTGATAGCCAATGAGGCATCATCATCACTACGTTATCCCGGTTTGTCTTGGATGCAAAACAATAATCATCATCAGAAGGCGCCTGCTAGTAGAGGGATAATAATGGAGCACGGCGAAGAAAGCAAGGCAGTAGTAGATGACATGGTGAAGGTGTCGGCCATTGCGTCAGATCCTAAGTTTAGGGTTGCTGTTGCGGCGGCCATAACATCATTCATCAATAACAATAATAAAGATCATGCTATTGGAGCCACTTCTTTTGCCGCTAATAGCAGCAGCAACAGCAGGACTACTGCCAACAACACCAACAACAACTGGATCTTAGATAATAATAATAATAATAATCATTCTCTTTCTAAAGATGCTAATCCATAA 1536 0.418 MSSKGKEPQNMMDIDLSLKIDHIENNKDGEATPPKVVASVKEDLKNKKKEETKALNINKEDFLEAAAGEIEDELPSQDNTKARELSVLQMEMESMKEENKVLRKVVEQTMKDYYDLQLKFSIIQENNNNKNKSKDHEISLSLHREENATIRKLHDEEGPRRIHHYQDEMFKFNNKIEKASSLANTDCGESLISESELGLSLRLETSTRKKEKEIDDEEDQKQEEEEEEEEEEEEEKKTQPANFASSSAATKLQRTHHHAFHAASPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASSAAASFMLLDSSTFNVNHQQPLLLNPNPNNKGVVLDLIANEASSSLRYPGLSWMQNNNHHQKAPASRGIIMEHGEESKAVVDDMVKVSAIASDPKFRVAVAAAITSFINNNNKDHAIGATSFAANSSSNSRTTANNTNNNWILDNNNNNNHSLSKDANP 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05624 511 MobiDBLite consensus disorder prediction 217 235 - -
Arst3g05624 511 SUPERFAMILY WRKY DNA-binding domain 276 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g05624 511 Coils Coil 41 61 - -
Arst3g05624 511 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g05624 511 MobiDBLite consensus disorder prediction 477 511 - -
Arst3g05624 511 Coils Coil 207 239 - -
Arst3g05624 511 FunFam probable WRKY transcription factor 31 268 345 - -
Arst3g05624 511 Pfam WRKY DNA -binding domain 284 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g05624 511 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 480 IPR044810 GO:0003700
Arst3g05624 511 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g05624 511 Gene3D WRKY domain 268 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g05624 511 Coils Coil 85 112 - -
Arst3g05624 511 MobiDBLite consensus disorder prediction 206 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05624 Arst-Chr3 130271395 130273604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05624 58 370 WRKY Transcription Factor Family AT1G68150 45.427 2.46e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst3g05624 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05624 - - aip:107631585 811.216