Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05598 ATGGTGGGAAGTGTTGATGTTTGGGGTACTGTTGATTCAAGCATGAATGGAGCAGGTGTAGGGGGATGTTTGATCAAAGAACTAGTCCATCATCATGGCGAAAGGGAGAAGATAGTTCCGGGAAGAGATATGCATACGGTGTCGTTTGAAATCACTGAACCAGATCTGGATGATGAGGTTACAGGAGAAAGAGAAGCTTTTATGGCTAGTGTTTTATCCAAGTACAAAAAATCCCTCACAGAAAAAACCAAGTTCCATCTAGGCTATCCGTACAATCTGGATTTCGACTACGATGCGCTGTGTCAGCTTCAGCACTTCTCCATAAACAACCTGGGGGATCCGTTTATCGAGAGCAACTACGGGGTGCACTCGAGGCAGTTCGAGGTTGGTGTTTTGGACTGGTTTGCAAGGTTGTGGGAACTTGACAAGAACCAGTACTGGGGATACATAACAAACTGTGGCACAGAAGGGAATCTCCATGGAATCCTTGTTGGCAGAGAGGTGTTCCCAGATGGAATCTTGTATGCCTCTCGCGAGATTGATTGCCATGATTTTAAGTCCAAGCTTCTTTCTAACAAGGATAAGCCTGCCATTGTTAATGTTAACATAGGTACAACTGTCAAAGGAGCTGTTGATGATCTTGATTTGGTTATTAACAAGCTTCAGGAAGCAGGATTCTCCCATGACAGATTCTATATCCATTGTGATGGGGCTTTGTTTGGTCTCATGTTACCTTTCGTCAAACGAGCTCCGAAAGTGAGTTTCAAGAAGGCAATTGGAAGCGTGAGTGTGTCAGGGCACAAATTCTTTGGGTGTCCAATGCCATGTGGGGTGCTGATAACAAGATTGGAACACGTGAAGGTGCTGTCAAGGAACGTAGAGTACCTTGCCTCGAGAGATGCAACAATCATGGGTAGCCGTAACGGCCACGCGCCACTCTTCCTATGGTACACTCTAAACAGAAAAGGATACAGGGGATTCCGGAAAGAGGTTCAGAAATGCTTGAGGAACGCACACTACTTCAAGGACCGCCTCGTCCACGCGGGGATCGGAGCAATGCTGAACGAGCTCAGCAGCACCGTCGTGTTTGAGCGCCCTCACGACGAGGAGTTCGTGCGCAAGTGGCAGTTGGCGTGCCAGGGGAACATAGCACATGTTGTGGTCATGCCAAATGTCACCATACACAAGCTGGATGGTTTTCTTGACGAGCTTGTGCAAAAGCGTGATGCATGGTTCGGAGAAGGGAAATCTCAGCCTCCTTGTATAGCTTCTGATGTTGGCATACATAATTGCCTTTGTGCTTTGCATAGGTGA 1314 0.4718 MVGSVDVWGTVDSSMNGAGVGGCLIKELVHHHGEREKIVPGRDMHTVSFEITEPDLDDEVTGEREAFMASVLSKYKKSLTEKTKFHLGYPYNLDFDYDALCQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELDKNQYWGYITNCGTEGNLHGILVGREVFPDGILYASREIDCHDFKSKLLSNKDKPAIVNVNIGTTVKGAVDDLDLVINKLQEAGFSHDRFYIHCDGALFGLMLPFVKRAPKVSFKKAIGSVSVSGHKFFGCPMPCGVLITRLEHVKVLSRNVEYLASRDATIMGSRNGHAPLFLWYTLNRKGYRGFRKEVQKCLRNAHYFKDRLVHAGIGAMLNELSSTVVFERPHDEEFVRKWQLACQGNIAHVVVMPNVTIHKLDGFLDELVQKRDAWFGEGKSQPPCIASDVGIHNCLCALHR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05598 437 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 261 282 IPR021115 GO:0016831
Arst3g05598 437 PANTHER - 178 437 - -
Arst3g05598 437 Pfam Pyridoxal-dependent decarboxylase conserved domain 184 356 IPR002129 GO:0016830|GO:0019752|GO:0030170
Arst3g05598 437 Gene3D - 177 319 IPR015421 GO:0003824
Arst3g05598 437 Gene3D Aspartate Aminotransferase, domain 1 320 409 IPR015422 GO:0003824
Arst3g05598 437 SUPERFAMILY PLP-dependent transferases 70 409 IPR015424 -
Arst3g05598 437 Gene3D - 103 176 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05598 Arst-Chr3 130081564 130083380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05598 203 343 Calmodulin-binding Proteins AT1G65960 25.333 9.59e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05598 K25193 - gmx:100792053 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05598 3 130081564 130083380 Arst10g00738 10 6141597 6147696 PCT