Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05596 ATGGCTTCCACTAATGGAACTTCACCTAACCACATTGAAATTCCCATGCATGCAAATGGTGCTGCTCTTGTGGTGCAGCCAAAACCAAACCAAGTGGTTGACCAAGAGAGCAATACTAACTACACTCAAAGGGCTCAGTGGCTCCGAGCAGCAGTGCTCGGAGCCAACGACGGACTAGTCTCAGTTGCATCACTCATGATGGGTGTTGGAGCTGTTAAGCATGACATCACAGCCATGGTTCTAGCAGGCTTTGCCGGCCTAGTAGCCGGAGCATGCAGCATGGCAATCGGAGAGTTTGTCTCTGTGTACACTCAGTATGACATAGAGAAGGCTCAGATAAAGAGAGAAGAAGAAGAAGTAGCGGATCATGAGAGGGAGAAGCTGCCAAATCCATTTCAAGCTGCAGCAGCATCAGCAGTGGCATTTTCTGTGGGTGGTGTGGTGCCAATGCTAGCAGCTTTGTTCATAAGGAACCATAAGGTTAGAATGGGTGTTGTTACTGTTGCTGTTAGCTTAGCATTGTTGGTGTTTGGAATTTTTGGAGCCATTCTTGGTAGAACTCCTGTCACAAGATCCTGTCTCAGGGTTCTCATTGGAGGTTGGATGGCTATGGCTATCACTTTTGGCTTCACCAAGTTGCTTGGCTCTGTTTCACTTTAG 660 0.4773 MASTNGTSPNHIEIPMHANGAALVVQPKPNQVVDQESNTNYTQRAQWLRAAVLGANDGLVSVASLMMGVGAVKHDITAMVLAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQIKREEEEVADHEREKLPNPFQAAAASAVAFSVGGVVPMLAALFIRNHKVRMGVVTVAVSLALLVFGIFGAILGRTPVTRSCLRVLIGGWMAMAITFGFTKLLGSVSL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05596 219 Coils Coil 106 126 - -
Arst3g05596 219 Pfam VIT family 125 211 IPR008217 GO:0005384|GO:0030026
Arst3g05596 219 Pfam VIT family 48 125 IPR008217 GO:0005384|GO:0030026
Arst3g05596 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 34 214 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05596 Arst-Chr3 130065983 130067029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05596 34 216 Nodulin-like Gene Family AT3G43660 67.760 6.10e-91 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05596 K22736 - gmx:100802489 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05596 3 130065983 130067029 Arst3g05596 3 130065983 130067029 ECH