Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05586 ATGGCAGCAGTGCATGCATTTGGCACCCTGTTGCTTGTTCTTTCCTCTCTGTTGAGCATTGTAATTGTATCCTCTGATATCAATTTTGTACAAAATGGATTTCTAGCAGCAGGCTTGAAACTTGATGGATCTTCTTATCTGGGGCCTAACGGTATACTTACCTTGACCAACGATTCCTCAAGGATCCTTGGCCATGCATTCTATCCATCTCCTTTACCATTCAAATCTAGCAGAAACAAATCCTTTGTTGCAACCTTTAGCACTTCCTTTGTGTTCTCCATCATTCCCAAATACCCTGAACTTGGTGGACATGGTCTTGCTTTCGTCCTAATATCGACAAGAGCACCGAAAGGTTGCCTTTTAAACCAATATTTAGGCCTCCCAAATGAGACAAGTAATCAAGAATTCTCTACCAGGTTCGTAGCTATAGAGTTTGATGGGATACAAAACCTTGAACTACAGGACATTGATGACAATCATGTGGGAATCGATATCTCCAGCCTCATCTCTGTGGTATCTGAGTCAGCAGCATACTATGGAAATGGCCAAGATCTCAGCAAGAACATTCCAATTAATCTCAAGAGTGGAGACCCCATTCAAGCATGGGTTGATTACAATGAAGAGAAGAAGTTGATGAATGTTACAATCTCTCCTTTTGGCATGCCAAAGCCATATTTCCCTCTGATATCTTTTCCTTTAGACCTATCTTTGGTGTTTAATGACTACATGTATGCAGGATTTTCTGCGTCCAATGGTTTATTGATAGCTGAGCATAATATACATGGTTGGAGCTTCACCATTGGAGGAGAAATGCAAGAGCTAAATAAATCAACTCTTCCACTCATTCGATCAACTACTATCATCCTGCGCGGATTAAGAAATAAGGACGAGATCTTAGAAGACTGGGAACTCAAATATGGAGCTTATAGATTTGGATACTCTGAGCTCTATTCAGCTACAGGAAGGTTTGGTGAGAAAAACCTTATTGGGTGTGGAGGATTTGGGAGAGTATACAGAGGAGTATTACCAACAGGACTTGAAGTAGCTGTGAAGCGAGTCACTCCTAATTCAAGGCAGGGAATGAGAGAATTTGTTGCAGAAATAACAAGCATGGGGAATCTAAGGCATAGAAATCTGGTGCAGTTACATGGGTGGTGCAGGAAGCAGGATGAACTCCTCCTTGTTTATGACTATGTCCCAAATGGAAGCCTAGATGCGCTTTTATTTGAGAATGATCATCAAAAGAAGAAGTTACTAACTTGGGACCAGAGATACAAGATCGTTACTGGTGTTGCACAAGGGCTGCTATACCTCCATGAAGAATGTCCACTGCAGGTGGTTCACAGAGATGTAAAGCCAAGCAATGTCTTGATAGATGCAGATCTGCAACCAAGGCTTGGTGATTTTGGCTTAGCAAGGTGTCAGGAGCACGGAATCAATCCGAAGACAACACATGTAGTAGGAACACTAGGATACATTGCACCTGAACTCTCCAAGACTGGGAAAGCAACAAGAAGCACGGATGTATATGGGTATGGTGTACTCATTTTGGAAGTAGCTTGTGGAAGAAGGCCAATAGAGCCCCAGAAGACTCCCAGGGAGCTGGTATTAGTGGACTGGGTGAGTGAACTACACTGCCAAGGGGAGATCGGCAGAGCAGTTGACCCAAGTTTAGATGAGTATGACAAAGATGAAGCTGATCTTGTGCTTAGGCTTGGATTGCTTTGTTGTCATCCCATACCTGATTATAGGCCTAATATGAGAAGAATTGTCCAGTTCCTTCTTAAAGAAACCACCCTTCCTCCAGTTCTTCCTGACATTTGTTGTGCCTGGGAACCTCCTAGAGCAATGAAGGAATATGAGCAAAATATTCGAGATGATTCTGACCCTTCAAGCTCTGGAGTGTTCTCATCAAACTATTTTAGTCATACAAGCTTTGACAAGTGA 1947 0.4253 MAAVHAFGTLLLVLSSLLSIVIVSSDINFVQNGFLAAGLKLDGSSYLGPNGILTLTNDSSRILGHAFYPSPLPFKSSRNKSFVATFSTSFVFSIIPKYPELGGHGLAFVLISTRAPKGCLLNQYLGLPNETSNQEFSTRFVAIEFDGIQNLELQDIDDNHVGIDISSLISVVSESAAYYGNGQDLSKNIPINLKSGDPIQAWVDYNEEKKLMNVTISPFGMPKPYFPLISFPLDLSLVFNDYMYAGFSASNGLLIAEHNIHGWSFTIGGEMQELNKSTLPLIRSTTIILRGLRNKDEILEDWELKYGAYRFGYSELYSATGRFGEKNLIGCGGFGRVYRGVLPTGLEVAVKRVTPNSRQGMREFVAEITSMGNLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDALLFENDHQKKKLLTWDQRYKIVTGVAQGLLYLHEECPLQVVHRDVKPSNVLIDADLQPRLGDFGLARCQEHGINPKTTHVVGTLGYIAPELSKTGKATRSTDVYGYGVLILEVACGRRPIEPQKTPRELVLVDWVSELHCQGEIGRAVDPSLDEYDKDEADLVLRLGLLCCHPIPDYRPNMRRIVQFLLKETTLPPVLPDICCAWEPPRAMKEYEQNIRDDSDPSSSGVFSSNYFSHTSFDK 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05586 648 CDD lectin_legume_LecRK_Arcelin_ConA 27 269 IPR001220 GO:0030246
Arst3g05586 648 SUPERFAMILY Protein kinase-like (PK-like) 306 611 IPR011009 -
Arst3g05586 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Arst3g05586 648 FunFam L-type lectin-domain containing receptor kinase S.4 399 606 - -
Arst3g05586 648 SMART serkin_6 323 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05586 648 Gene3D Phosphorylase Kinase; domain 1 289 398 - -
Arst3g05586 648 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 270 IPR013320 -
Arst3g05586 648 FunFam receptor-like protein kinase FERONIA 291 398 - -
Arst3g05586 648 Gene3D Transferase(Phosphotransferase) domain 1 399 600 - -
Arst3g05586 648 Gene3D - 25 285 - -
Arst3g05586 648 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Arst3g05586 648 FunFam L-type lectin-domain containing receptor kinase S.4 25 273 - -
Arst3g05586 648 Pfam Legume lectin domain 27 279 IPR001220 GO:0030246
Arst3g05586 648 CDD STKc_IRAK 329 596 - -
Arst3g05586 648 ProSiteProfiles Protein kinase domain profile. 323 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05586 648 PANTHER - 47 598 - -
Arst3g05586 648 Pfam Protein kinase domain 325 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05586 Arst-Chr3 129975843 129978205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05586 26 624 Receptor kinase-like Gene Family AT3G55550 45.554 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst3g05586 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05586 - - ahf:112792279 1264.6