Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05574 ATGGATGCTTTGTTGTTGAGCTCATTTCAGTGCCTTCCATGGCTCTCATCAACCAAGCAGCAAAGGCACTATTCTCATATGCATCTTTCATGCAGAGCCACAAAGGTGGAGTGTGAGAGCAACTTCTACAAGGTTCTGAGTGTTAGTCCAAAGAGTGCAACCATGGATGAGATCAAGAGAGCTTATAGATCCATGGCGCTTCAGTACCATCCAGATGTGTGCCATGATCCTTCCATGAAGGAGGAGTCTAATAGGATGTTTGTGCAGTTGAATGCTGCTTATGAGACCTTGTCCAACCCCATGCTTAGACAACAGTATGATAGTCAATTAGGTTTGAGTGTCAGCCATGATTATTCTGAAACTAGTTTGAGGAGCCTTTGGGAGGAGGAGCAACACCAAGTGGTTGTTGAATTGAAGACAAGGTCTCGGAGACGCATGGAGCAAAAGGCCAACAGAATGAGGGCACCAACCAGAAGAAAAGACAGGAACTGA 492 0.4553 MDALLLSSFQCLPWLSSTKQQRHYSHMHLSCRATKVECESNFYKVLSVSPKSATMDEIKRAYRSMALQYHPDVCHDPSMKEESNRMFVQLNAAYETLSNPMLRQQYDSQLGLSVSHDYSETSLRSLWEEEQHQVVVELKTRSRRRMEQKANRMRAPTRRKDRN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05574 163 Gene3D DnaJ domain 26 137 IPR036869 -
Arst3g05574 163 MobiDBLite consensus disorder prediction 141 163 - -
Arst3g05574 163 CDD DnaJ 41 99 IPR001623 -
Arst3g05574 163 ProSiteProfiles dnaJ domain profile. 41 110 IPR001623 -
Arst3g05574 163 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 27 159 - -
Arst3g05574 163 SUPERFAMILY Chaperone J-domain 28 106 IPR036869 -
Arst3g05574 163 PRINTS DnaJ domain signature 62 77 IPR001623 -
Arst3g05574 163 PRINTS DnaJ domain signature 82 102 IPR001623 -
Arst3g05574 163 PRINTS DnaJ domain signature 44 62 IPR001623 -
Arst3g05574 163 SMART dnaj_3 40 102 IPR001623 -
Arst3g05574 163 Pfam DnaJ domain 41 107 IPR001623 -
Arst3g05574 163 ProSitePatterns Nt-dnaJ domain signature. 87 106 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05574 Arst-Chr3 129902525 129903141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05574 43 108 C2H2 Transcription Factor Family AT1G74250 44.118 1.02e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05574 - - aip:107631621 296.589