Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05568 ATGGGATTTTCTCTTTTTGGTCTTCAACAACTTGTTACTTCTTTTGCAGTTGTTGCCACATTATTGAGCATTGTTGGCACAGCACAAGAGGGTCCTATCAATTCTTTAAGCCGTAGATTTATCCATTCCCACATCAATGAACAAGAAAACGATAACAATAATTCTCCTATTATTGCTCGCGTACTGCAAGATAATCAAGGCAACGATTCTCCATCACCAGGTCACAACAATACTCCAGCTTTGTTATTAATCCTGAATGTGGTTCTTGTTCTTGCAATCATACTGCTCTTGATGCTATACTACAACACAGCAAGAAAACTGAACAAGATGATGAAGTTGCAGCAGCAGGATCCCAATAACAAAAAATGCATTGTTGTGAAGAAAGAGGTGGAAAAAGAGGATATTGAAGAGAGCAGCGGTTGGGAGAAGAAGATAGAGATAGGAGAAGGTACAAAGATGAGGGTGGAGGAGAGAAAAGAACTCATGTTCTTCAACGGCAACAAGACAAGGTTTGAGATGGGACAACTTCTAAGGGCGTCAGCAGAGACACTGGGACAGGGAATGATGGGAAACAGTTACAAGGCCATGATGCATGATGGACCGACCATTGTTGTGAAGAGGCTGAGGGACTTGAAACCTTTCAGTGAGAAGGAATTCGAAGCACTGCTGCGTGTCATTGCAGGGATGCAGCACCCTAATTTGTTGCCTTTGCTTGCTTACTACCATTCAAGAGATGAAAAGCTGCTTCTCTACAAATATGCACAGAATGGGAACCTTTTCTCTAGGCTTCACGATGGTAGAGATGGAAATCGGGTGCCATTGAAATGGAATTCAAGGCTATCAATTGCAAAATCCGTAGCTGGAGCAATGGAGTACCTGCACAGTAACACCAAGAACCCTAACATTGTCCCACACGGCAACCTCAAGACCACAAACGTGCTCATAGACGAAAACGACGTCGCCCTCGTCTCCGACTACGGCCTCTCCGCCCTAATAGCCCAACCTATCGCCGTTCAGCGCATGGTCATTTATAACTCACCGGAATACGTCCAGTCAAAGCGAGTGACAGCGCAGTCCGATGTTTGGAGCTACGGATGCCTCCTCCTCGAGCTCTTAACCGGAAAAATTTCTGCCTGCTCTTCTCCGCATGGATCGAACGGTGTTGATCTGTGCGGTTGGGTTCATAGAGCGGTGAGGGAGGAATGGACGGCTGAGATCTTTGATAAAGAGATCTATAGGCAGAAGAATGTTCAGAGTGGGATGATACGGATGCTTGAGATTGCGATGCTTTGTACGGAGAGGTTCCCGGAGAATCGGCCTAGGATGAGCCAGGTTGTTAGGGAAGTTGAGAAGATACAGGCGGTGCCGGCGGCGTCGGAGTCGGTGGATGAGGATGATCTCTCTGCTGAGAGGTCTTTCACTGATGATTCTCTTTCTATGTATTCAACAAGTCACTCTGGAATTATTCTTGCAGATAATTAA 1482 0.4582 MGFSLFGLQQLVTSFAVVATLLSIVGTAQEGPINSLSRRFIHSHINEQENDNNNSPIIARVLQDNQGNDSPSPGHNNTPALLLILNVVLVLAIILLLMLYYNTARKLNKMMKLQQQDPNNKKCIVVKKEVEKEDIEESSGWEKKIEIGEGTKMRVEERKELMFFNGNKTRFEMGQLLRASAETLGQGMMGNSYKAMMHDGPTIVVKRLRDLKPFSEKEFEALLRVIAGMQHPNLLPLLAYYHSRDEKLLLYKYAQNGNLFSRLHDGRDGNRVPLKWNSRLSIAKSVAGAMEYLHSNTKNPNIVPHGNLKTTNVLIDENDVALVSDYGLSALIAQPIAVQRMVIYNSPEYVQSKRVTAQSDVWSYGCLLLELLTGKISACSSPHGSNGVDLCGWVHRAVREEWTAEIFDKEIYRQKNVQSGMIRMLEIAMLCTERFPENRPRMSQVVREVEKIQAVPAASESVDEDDLSAERSFTDDSLSMYSTSHSGIILADN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05568 493 SUPERFAMILY Protein kinase-like (PK-like) 182 455 IPR011009 -
Arst3g05568 493 Gene3D Transferase(Phosphotransferase) domain 1 254 476 - -
Arst3g05568 493 Gene3D Phosphorylase Kinase; domain 1 143 253 - -
Arst3g05568 493 ProSiteProfiles Protein kinase domain profile. 178 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05568 493 Pfam Protein tyrosine and serine/threonine kinase 182 448 IPR001245 GO:0004672|GO:0006468
Arst3g05568 493 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 66 454 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05568 Arst-Chr3 129866975 129869131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05568 123 471 Receptor kinase-like Gene Family AT5G58300 41.360 2.79e-85 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst3g05568 PK_Tyr_Ser-Thr 5.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05568 - - mtr:11421603 521.931