Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05536 ATGGCGGAGCGTTCTTCCTCTTTTGGACTTGGTCCTCGATTAGATCTTCAGCAACTGCAGTTTGAAGCACAGCATCGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTCGTAACTATCGTATGTTTCATATCACATCAGAACCACCAAACAGGCCACCAAGTGGTTCGCTTTTTCTTTTTGATCGGAAGGTTTTGAGATACTTCAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCACGGAGAAGAAAATGAAAATTTTCAGAGGCGTAGCTATTGGATGCTTGAACAGGATATGATGCATATAGTATTTGTCCACTATTTGGATGTTAAGGTTAACAAGACCAATATCGGTAGAAATATTGATACAGATGAGGCTATGTCAGAATCCCAGAAGGGCAGTTCTGTGTTATCTGGCTTCCCCACAAGTTATAACAGCATGCCTTCTCGAAGTACAGATTCCATGAGTCCGACTAGCACTTTGACGTCATTATGTGAAGATGCTGATTCTGAGGATATTCGTCAAGCAAGTTCTGGAATGCACTCGTTTGGCAACTCTTTGGGGAGTGGTCAGGCAATGGATAGCATTGATACTTGTTCAAATAGATCATATTTTATGCTTCCCATTTCAGGTGATCATGGACAATCAACAATTTCTGTAACAGACTACATTCCACATGTCCAAGGGGATACATCTAGATTAGGTATTACTGCTTACATTGAGGACCAAAAATCACATGTCATGCCATTAAGGGACACTATCACAGAGCAATCTGTTGGATTGTATACACCTTGTTCTTCCATTTCATCCGGTTCAATGGGAAGCACCCTTGAACAAGAAAAAGCTGTTCCTGAGAATCTCTACGGATCTAAAAGTGGCCTCAATGAGGACTCAAGGGGTTCTCAGTCTACCCAGTCAAATTGGCAGATTACTTTTGATGAGAATACTGGACCTTTGCCAAGATGGAGCCTAACCGAATCGTTGGGTTTGGAATTTGAATCTGATTATAGCATGGCTTTATTTGGGAGTGAAACTGATAATGCAATTCCAGAGATTTGCCCTGACTTGTTCACTTCTAATGGAGAGCTAAAAGAGCAACCTGTGCAACAGAAGTTCCCAAAGCAGTCTACAGATGCACAATCTCAGCATGCACCAAGATCCGACAGTGAATATGAACTTCCTCGGGAGGATAGTACTGGCTATTCCTTGAATGCAAAGCATGCATTACTTGATGGAGAGGAGAACCTGAAGAAGGTTGATAGCTTCTCAAGGTGGATTACTAAAGAACTTGGAGAGGTGGATGATCTGCATCTGCAGTCTTCCCCTGGTATTTCATGGAGCACAGATGAGTGTGGGCATGTAATAGATGATACATCATTGAACCTGTCCTTATCCCAAGATCAGCTGTTCAGCATAAGTGATTTTTCACCTAAATGGGCTTATGCAGATTCCGAGATTGAGGTGTTGATTATTGGAGCATTTTTGAAGAGTCAACTGGAGGTGGAAGCCTGTCACTGGTCCTGTATGTTTGGGGAAGTGGAGGTCCCTGCTGAGGTTTTAACTAATGGAATTCTGTGTTGCCAGGCTCCACCTCATAAGGTTGGACGGGTTCCTTTCTATGTAACTGAAGTGAGGGAATTTGAGTTCAGAGAGGGATTTGCTAGGAATGTAGATTTTGCAGATTTTTTCTACAGTTCAACTGAAATGATGCTTCATTTGCGACTTGATGAGTTACTTTCTTCGAAATCAGTGCTATCTACTAATCAAGATTTTGAGGGTTATATGGAGACAAGAAACTTAATTTTTAAGCTCATCTCACTTAAAGAGGAAGAGGAATATTCACATAAGGAAGAGGCAACTGCAGGGTTGAGTGTATCACAACACAAATTGGAGGAGCATGTGTTTCACAGGAAGATTAAAGAGAAGCTCTACTCATGGCTTCTTCACAAGGTAACTGAAGGTGGTAAAGGGCCAAATGTATTAGACAAGGATGGTCAGGGTGTGTTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCAATAACTCCAGTTATAACTGCTGGGGTTAATATCAACTTCCGTGATGTGAATGGATGGACAGCTTTACATTGGGCTGCATCCTGTGGCAGAGAGCGAACAGTTGCTGTCCTTGTCTCCATGGGTGCAGCAGCTGGAGCATTGACAGATCCAAGTCCAGCATTTCCTTCTGGTAGAACAGCTGCTGATCTTGCTTCTAGCAATGGACATAAAGGAATCTCTGGTTTTCTTGGAGAGTCATTATTAACTAGCCACCTTGCGTCACTTACAATGGATGATCCAAGTGAAGATGGTAGGAATAAAACTTTAGGTGGGAAAGCAGTGCAGACAGCTTCGGAGCGAAGTGCAACACCTCTACTTTATGGTGATGTATCGGATACTCTCTGCCTTAAGGATTCTCTTTCTGCTGTCCGTAATGCTACACAAGCCGCCGATCGCATACATCAAGTATTTAGGATGCAGTCATTTCAGAGGAAGCAGTTAGCTCAGTGTGAAGACGATGATGAGTTTGGATTGTCAGATCAACAGGTTCTTTCCTTTATAGCTTCTAGGGCTTGCAAATCTGGACAAGGAGAGGGTTTAGTGAATGCTGCTGCAATACAAATTCAGAAAAAATTTCGTGGTTGGAAGAAGAGAAAAGAATTCCTGATCATTCGCCAAAGAGTTGTCAAAATCCAGGCCCACGTAAGAGGTCACCAGGTAAGGAAGCAATACAAATTAATCTGGTCTGTTGGAATCCTTGAGAAGGTCATATTACGCTGGAGACGTAAGGGCAGAGGCTTACGTGGATTCCGACCAGATACCCTTAACATGGTCCCCAACCCACCAAGCAATCCTTCACAAGAGGATGACTATGATGTTCTCAAAGAAGGAAGGAAGCAAAGTGAAGAAAGGTTCCAAAAAGCCCTTTCAAGGGTGAAATCCATGGTCCAGTACCCGGAGGCACGTGCTCAATACCGGCGGGTGCTGAATGTAGTAGAGGACTTTCGTCAAACCAAGCAGGAATATACCAATTCGGAAGACACTGTTGATGGGGTGGCGGATTTGATTGATATTGATATGCTTTTGGACGATGAGAACTTGCCTATAGCATATGATTGA 3216 0.4291 MAERSSSFGLGPRLDLQQLQFEAQHRWLRPAEICEILRNYRMFHITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEQDMMHIVFVHYLDVKVNKTNIGRNIDTDEAMSESQKGSSVLSGFPTSYNSMPSRSTDSMSPTSTLTSLCEDADSEDIRQASSGMHSFGNSLGSGQAMDSIDTCSNRSYFMLPISGDHGQSTISVTDYIPHVQGDTSRLGITAYIEDQKSHVMPLRDTITEQSVGLYTPCSSISSGSMGSTLEQEKAVPENLYGSKSGLNEDSRGSQSTQSNWQITFDENTGPLPRWSLTESLGLEFESDYSMALFGSETDNAIPEICPDLFTSNGELKEQPVQQKFPKQSTDAQSQHAPRSDSEYELPREDSTGYSLNAKHALLDGEENLKKVDSFSRWITKELGEVDDLHLQSSPGISWSTDECGHVIDDTSLNLSLSQDQLFSISDFSPKWAYADSEIEVLIIGAFLKSQLEVEACHWSCMFGEVEVPAEVLTNGILCCQAPPHKVGRVPFYVTXEVREFEFREGFARNVDFADFFYSSTEMMLHLRLDELLSSKSVLSTNQDFEGYMETRNLIFKLISLKEEEEYSHKEEATAGLSVSQHKLEEHVFHRKIKEKLYSWLLHKVTEGGKGPNVLDKDGQGVLHLVAALGYDWAITPVITAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGAAAGALTDPSPAFPSGRTAADLASSNGHKGISGFLGESLLTSHLASLTMDDPSEDGRNKTLGGKAVQTASERSATPLLYGDVSDTLCLKDSLSAVRNATQAADRIHQVFRMQSFQRKQLAQCEDDDEFGLSDQQVLSFIASRACKSGQGEGLVNAAAIQIQKKFRGWKKRKEFLIIRQRVVKIQAHVRGHQVRKQYKLIWSVGILEKVILRWRRKGRGLRGFRPDTLNMVPNPPSNPSQEDDYDVLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKQEYTNSEDTVDGVADLIDIDMLLDDENLPIAYD 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05536 1072 ProSiteProfiles IQ motif profile. 924 949 IPR000048 GO:0005515
Arst3g05536 1072 MobiDBLite consensus disorder prediction 317 342 - -
Arst3g05536 1072 MobiDBLite consensus disorder prediction 378 423 - -
Arst3g05536 1072 Gene3D - 660 790 IPR036770 -
Arst3g05536 1072 Gene3D Immunoglobulins 491 584 IPR013783 -
Arst3g05536 1072 FunFam Calmodulin-binding transcription activator 2 900 948 - -
Arst3g05536 1072 Pfam IPT/TIG domain 497 568 IPR002909 -
Arst3g05536 1072 ProSiteProfiles CG-1 DNA-binding domain profile. 16 142 IPR005559 GO:0003677
Arst3g05536 1072 Pfam CG-1 domain 22 135 IPR005559 GO:0003677
Arst3g05536 1072 SMART iq_5 900 922 IPR000048 GO:0005515
Arst3g05536 1072 SMART iq_5 923 945 IPR000048 GO:0005515
Arst3g05536 1072 SMART CG_1_2 19 137 IPR005559 GO:0003677
Arst3g05536 1072 SUPERFAMILY E set domains 498 570 IPR014756 -
Arst3g05536 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 900 947 IPR027417 -
Arst3g05536 1072 ProSiteProfiles Ankyrin repeat profile. 724 756 IPR002110 GO:0005515
Arst3g05536 1072 MobiDBLite consensus disorder prediction 154 188 - -
Arst3g05536 1072 Gene3D - 901 948 - -
Arst3g05536 1072 Pfam IQ calmodulin-binding motif 926 945 IPR000048 GO:0005515
Arst3g05536 1072 Pfam IQ calmodulin-binding motif 903 921 IPR000048 GO:0005515
Arst3g05536 1072 MobiDBLite consensus disorder prediction 298 342 - -
Arst3g05536 1072 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 1038 - -
Arst3g05536 1072 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 1038 - -
Arst3g05536 1072 Pfam Ankyrin repeats (3 copies) 696 779 IPR002110 GO:0005515
Arst3g05536 1072 ProSiteProfiles IQ motif profile. 902 930 IPR000048 GO:0005515
Arst3g05536 1072 ProSiteProfiles Ankyrin repeat region circular profile. 724 749 - -
Arst3g05536 1072 MobiDBLite consensus disorder prediction 971 990 - -
Arst3g05536 1072 MobiDBLite consensus disorder prediction 388 413 - -
Arst3g05536 1072 SUPERFAMILY Ankyrin repeat 680 783 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05536 Arst-Chr3 129710550 129718254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05536 1 1039 CAMTA Transcription Factor Family AT5G64220 53.220 0.0 1036
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Arst3g05536 CG-1 2.4e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05536 K21596 - gmx:100795682 1563.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05536 3 129710550 129718254 Arst10g00681 10 5685248 5689938 PCT