Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05534 ATGGATAGTCTCTGTTGCTTCAGCTCTGTTAGAGGGGTGGTTGGAGGGCATTCTTCAAGTAACTCTGGAAAGGGCAAGAGCCATCAGTCTACAACCAAGTATGGCTATAGCCTTGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCATGTAGCGAAATTTGTCCAGTTCAAGGGGCAAGAGCTGGGACTTTTTGCTATATATGATGGACACTTGGGAGATAGCGTACCAGCATATTTACAAAAGCATCTTTTTTCAAATATCTTGGATGAAAAGGACTTTTGGGAAGATCCGTTCATGTCTATTTCTAAAGCTTATGAGACAACAGATCAAGCAATTCTTTCTCACAGTCCTGATTTGGGACGAGGAGGGTCAACTGCTGTGACTGCAATTCTTATAAATAGTCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTGGCTGTACAGATGACTACTGACCATGAACCTAATACTGAGCGGGGCAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGGGTGAATGGGCAGCTTGCAGTTTCGCGAGCATTTGGAGACAGAAACCTCAAAACACATCTGCGATCGGATCCTGACATCCAGTAA 651 0.4501 MDSLCCFSSVRGVVGGHSSSNSGKGKSHQSTTKYGYSLVKGKANHPMEDYHVAKFVQFKGQELGLFAIYDGHLGDSVPAYLQKHLFSNILDEKDFWEDPFMSISKAYETTDQAILSHSPDLGRGGSTAVTAILINSQKLWVANVGDSRAVLSRGGVAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDRNLKTHLRSDPDIQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05534 216 FunFam Probable protein phosphatase 2C 39 24 216 - -
Arst3g05534 216 CDD PP2Cc 33 216 IPR001932 -
Arst3g05534 216 ProSiteProfiles PPM-type phosphatase domain profile. 33 216 IPR001932 -
Arst3g05534 216 Pfam Protein phosphatase 2C 42 215 IPR001932 -
Arst3g05534 216 Gene3D - 15 216 IPR036457 -
Arst3g05534 216 SUPERFAMILY PP2C-like 29 215 IPR036457 -
Arst3g05534 216 PANTHER PROTEIN PHOSPHATASE 28 216 IPR015655 GO:0004722|GO:0006470
Arst3g05534 216 SMART PP2C_4 29 210 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05534 Arst-Chr3 129694614 129698747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05534 1 216 PP2C-type Phosphatase Gene Family AT1G34750 74.654 7.68e-117 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05534 K17506 - gmx:100801722 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05534 3 129694614 129698747 Arst3g05534 3 129694614 129698747 ECH
Arst3g05534 3 129694614 129698747 Arst10g00680 10 5679095 5682652 PCT