Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05518 ATGGCAGCTGAAAAAGAAGACTACAATGGGAGATTAGGTTCAAAGTCAAAGCAGACTGGGATGATCCTAATCAATGGCCGCAAACAAGCACTGGCATATGGAACATCTGCATATGTCACAGAAGATGATACTATCTTGACAACACTGACAGTTGGAGAAGCTGTATACTACTCAGCCCAGCTCCAATTACCAGATTCCATGTCCAAATCAGAGAAGAAGGAGAGAGCAGAGTTCACAATAAGAGAAATGGGCCTGCAAGATGCCATCAACACAAGAATTGGAGGGTGGGGATCTAAGGGAATTAGTGGTGGACAAAAGAGGAGAGTTAGCATTTGCATTGAGATCTTAACACATCCAAGACTCTTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCCTCTTATTATGTTATGAGTAGAATTGCAAGCTTAAATAAAAAAAATGGAATTCAAATGACTATTATTGCATCAATCCATCAACCAAGTAATGAAATCTTTCAGCTTTTCAACAATCTCTGTCTCCTCTCTTCTGGTAAAACAGTCTACTTCGGACCTGTCTCAGCTGCCAATAAGTTTTTCTCATCAAATGGTTTTCCTTGCCCAAGTCTCCAGAATCCTCCTGATCACTTTGTAAAAATTATTAACAAGGATTTTGAACAGGAGGAGGACCCTGAGAAAGGATTAGCTAGAGGGCTAACCACAGAAGAAGCAATTCATATACTTGTTGAATCATATGATTCATCTAAAATTAGTCACCAAGTTCATAAAGAAATATCTCAAATGAAAAAAAGGGACTCAGATGCAATGGAGAAGAAAAGTCATGCTGATTTTTTAACACAGTGCATGGTCCTTACTAGGAGATCTTTTGTGAACATGTATCGTGAAGTAGGCTACCACTGGTTGCGCCTACTTATCTATGGTGCTCTGGCTTTAAGTCTTGGTACCATGTTTTTTCACATTGGCTCAAGCAGTGAATCAATTCAGGCCAGAGCTTCACTGCTTGTGTTTGTTGTTACATTCCTTACCTTCATTACTGTTGGTGCATTCCCTTCTTTTGTGGAAGATATGAAGGTGTTTGAAAGAGAAAGACTGAATGGACATTATGGGGTAACTGCATACACCATTGGCAACACATTATCTTCAGTTCCATTCTTGCTATTGATGTCACTCATCCCTGGAGCAGTGGTTTATTACTTGGTTGGACTTCACCAAGGACACAAAGAATTCATCTACTTTACATCTGTACTCTTTGTTTCTGTCTTTTTGGTTGAGGGTCTCATGATGATTGTTGCAAGCATTGTCCCCAATTTCCTGCTAGGCATAATCTTCGGCACCGGAATATTGGGAGTGATGATGTTGGATGGTGGATTCTATAGGCTTCCAAGCGATATCCCTAAACCGTTTTGGAGATACCCTTTGCATTACATTTCATTCCACAAGTATGCATACCAAGGATTGTTCAAGAACGAGTTTCAAGGCCTAACATTCACCGGCAATAATCAAGATGGAGGAGCTATGATAAACATTAGTGGGGAAGAGATACTTAGAAACTTGTGGCAAGTGGAAATTGGTTACTCAAAATGGAATGATGTTGCTATATTGATAGGAATGGCAGTGACATACAGATTGTTGTTCTTGGTGATCATCAAGAGCTTTGAGAAAGTGAAGCCTATTATTGTGACAGCAATGAATAATTGCCCGCAAGCAAAGTTCAGGTTCACTAAGGTGACTAGACTAGGAGCAATGGCATGA 1758 0.4005 MAAEKEDYNGRLGSKSKQTGMILINGRKQALAYGTSAYVTEDDTILTTLTVGEAVYYSAQLQLPDSMSKSEKKERAEFTIREMGLQDAINTRIGGWGSKGISGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLNKKNGIQMTIIASIHQPSNEIFQLFNNLCLLSSGKTVYFGPVSAANKFFSSNGFPCPSLQNPPDHFVKIINKDFEQEEDPEKGLARGLTTEEAIHILVESYDSSKISHQVHKEISQMKKRDSDAMEKKSHADFLTQCMVLTRRSFVNMYREVGYHWLRLLIYGALALSLGTMFFHIGSSSESIQARASLLVFVVTFLTFITVGAFPSFVEDMKVFERERLNGHYGVTAYTIGNTLSSVPFLLLMSLIPGAVVYYLVGLHQGHKEFIYFTSVLFVSVFLVEGLMMIVASIVPNFLLGIIFGTGILGVMMLDGGFYRLPSDIPKPFWRYPLHYISFHKYAYQGLFKNEFQGLTFTGNNQDGGAMINISGEEILRNLWQVEIGYSKWNDVAILIGMAVTYRLLFLVIIKSFEKVKPIIVTAMNNCPQAKFRFTKVTRLGAMA 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05518 585 Pfam ABC transporter 17 129 IPR003439 GO:0005524
Arst3g05518 585 Pfam ABC-2 type transporter 161 260 IPR043926 GO:0140359
Arst3g05518 585 Gene3D - 10 196 IPR027417 -
Arst3g05518 585 ProSitePatterns ABC transporters family signature. 101 115 IPR017871 GO:0005524|GO:0016887
Arst3g05518 585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 193 IPR027417 -
Arst3g05518 585 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 9 567 - -
Arst3g05518 585 Pfam ABC-2 type transporter 281 493 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05518 Arst-Chr3 129573077 129576134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05518 85 139 Calmodulin-binding Proteins AT2G36910 43.636 7.35e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05518 K05681 - gmx:100789571 939.488