Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05517 ATGCTACCCGTTTTGTTGGAATATGAGACCACATTTGAGGTGGAAGCCATGAATGAGGTGGATCATCAAGAGGAGAAGGGGGTTTTCATAACATGGGAGGATCTATGGGTGACAGTCTCAGATGGCAAGAATGGAAGGAAAGCAATACTTCAGGGCCTGAAAGGTTATGCCAAACCAGGGCAACTCTTGGCTATAATGGGTCCTTCTGGTTGTGGAAAGTCTACTCTTCTTGATGCCTTAGCAGGGAGATTAGGTTCAAAGTCAAAGCAGACTGGGATGATCCTAATCAATGGCCGCAAACAAGCACTGGCATATGGAACATCTGCATATGTCACAGAAGATGATACTATCTTGACAACACTGACAGTTGGAGAAGCTGTATACTACTCAGCCCAGCTCCAATTACCAGATTCCATGTCCAAATCAGAGAAGAAGGAGAGAGCAGAGTTCACAATAAGAGAAATGGGCCTGCAAGATGCCATCAACACAAGAATTGGAGGGTGGGGATCTAAGGGAATTAGTGGTGGACAAAAGAGGAGAGTTAGCATTTGCATTGAGATCTTAACACATCCAAGACTCTTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCCTCTTATTATGTTATGAGTAGAATTGCAAGCTTAAATAAAAAAAATGGAATTCAAATGACTATTATTGCATCAATCCATCAACCAAGTAATGAAATCTTTCAGCTTTTCAACAATCTCTGTCTCCTCTCTTCTGGTAAAACAGTCTACTTCGGACCTGTCTCAGCTGCCAATAAGTTTTTCTCATCAAATGGTTTTCCTTGCCCAAGTCTCCAGAATCCTCCTGATCACTTTGTAAAAATTATTAACAAGGATTTTGAACAGGAGGAGGACCCTGAGAAAGGATTAGCTAGAGGGCTAACCACAGAAGAAGCAATTCATATACTTGTTGAATCATATGATTCATCTAAAATTAGTCACCAAGTTCATAAAGAAATATCTCAAATGAAAAAAAGGGACTCAGATGCAATGGAGAAGAAAAGTCATGCTGATTTTTTAACACAGTGCATGGTCCTTACTAGGAGATCTTTTGTGAACATGTATCGTGAAGTAGGCTACCACTGGTTGCGCCTACTTATCTATGGTGCTCTGGCTTTAAGTCTTGGTACCATGTTTTTTCACATTGGCTCAAGCAGTGAATCAATTCAGGCCAGAGCTTCACTGCTTGTATTTGTTGTTACATTCCTTACCTTCATTACTGTTGGTGCATTCCCTTATTTTGTGGAAGATATGAAGGTGTTTGAAAGAAAAAGACCGAATGGACATTATGGGGTAACTGCATACACCATTGGCAACACATTATCTTCAGTTCCATTCTTGCTATTGATGTCACTGATCCCTGGAGCAGTGGTTTATTACCTAGTTGGACTTCACCAAGGACACCAAGAATTCATCTACTTTACATCTATACTCTTTGTTTCTGTCTTTTTGGTTGAGGGTCTCATGATGATTGTTGCAAGCATTGTCCCCAATTTCCTGCTAGGCATAATCTTTGGCACCGGAATATTGGGAGTGATGATGTTGGATGGTGGATTCTATAGGCTTCCAAGCGATATCCCTTAA 1620 0.4086 MLPVLLEYETTFEVEAMNEVDHQEEKGVFITWEDLWVTVSDGKNGRKAILQGLKGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSKSKQTGMILINGRKQALAYGTSAYVTEDDTILTTLTVGEAVYYSAQLQLPDSMSKSEKKERAEFTIREMGLQDAINTRIGGWGSKGISGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLNKKNGIQMTIIASIHQPSNEIFQLFNNLCLLSSGKTVYFGPVSAANKFFSSNGFPCPSLQNPPDHFVKIINKDFEQEEDPEKGLARGLTTEEAIHILVESYDSSKISHQVHKEISQMKKRDSDAMEKKSHADFLTQCMVLTRRSFVNMYREVGYHWLRLLIYGALALSLGTMFFHIGSSSESIQARASLLVFVVTFLTFITVGAFPYFVEDMKVFERKRPNGHYGVTAYTIGNTLSSVPFLLLMSLIPGAVVYYLVGLHQGHQEFIYFTSILFVSVFLVEGLMMIVASIVPNFLLGIIFGTGILGVMMLDGGFYRLPSDIP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05517 539 Pfam ABC-2 type transporter 233 334 IPR043926 GO:0140359
Arst3g05517 539 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 21 539 - -
Arst3g05517 539 Gene3D - 29 299 IPR027417 -
Arst3g05517 539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 265 IPR027417 -
Arst3g05517 539 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 276 IPR003439 GO:0005524
Arst3g05517 539 Pfam ABC-2 type transporter 353 539 IPR013525 GO:0016020|GO:0140359
Arst3g05517 539 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Arst3g05517 539 Pfam ABC transporter 52 201 IPR003439 GO:0005524
Arst3g05517 539 FunFam ABC transporter G family member 11 28 318 - -
Arst3g05517 539 SMART AAA_5 59 248 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05517 Arst-Chr3 129572234 129585189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05517 49 211 Calmodulin-binding Proteins AT2G36910 29.341 6.97e-09 57.0