Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05455 ATGGGGGTTCACAAAGTAAGGAAGAAGAGAGAGTGTGCTCATGGTTATACACTTTGGCTCACTCTCAGAAATACATTGCCTTCGAGTCTAAGTTTCACTGAAGCAGAGAGGAGGCTAAAGGAAAATGGGCCAAATGTTCCACTTGAGTATTCTTTTCCAAGGTGGTGGCATCTTTTGTGGAATTCTCTTTTCCATCCTTTTAACATGATCCTCATTGTTTTATCTGCAATGTCATTCATTGCTTGTGACGATGCAAATGGATGCATCATGCTTATACTGGTTTTCATTAGTGTTGCCCTTCGTTTCTGTCAGGAATACAGCAGCTCAAAAGCAGCCATGAAACTTTCTGAATTGGTAAGGTGCCCAGTAAAAGTGCAAAGATGCGCTGGTAGAGTTGTGCAGAGAGAGTTAATTGTTCAAGTTGATCACAGGGATATAGTTCCCGGCGACATTGTCATTTTTGAACCTGGTGATCTCTTTCCTGGTGATGTTAGGTTGTTATCTTCAAAGCATCTTGTTGTGAGCCAGGCCTCACTAACTGGGGAATCTTGGACAACTGAGAAAACTGCTGATATCAGAGAAGATCAAAGCACTCCTTTATTAGATTTAAAGAACATCTGCTTCATGGGCACGAGCGTGGTTTCAGGTACTGGAACAGGATTGGTTGTATCGACAGGATCCAATACTTATATGAGCACCATGTTTTCAAAAGTTGGGAAGAGGAAGCCACCAGATGACTTTGAAAAGGGTCTCAAGTGGATATTTTACTTGCTTATTTCAGTTATGCTAGTGCTAGTTACAATTATGTTCTTGACAGATTACCTTACATCACTTAATTTGAGCAACAGCATTCTTTTTGCAATCTCAGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTCATTGTGAATACATGTCTAGCCAAAGGAGCACTTGCTATGGCTAAAGACAAGTGTATAGTTAAAAGTTTGACTGCGATTCGCGAGATGGGATCCATGGATATTCTATGTATTGACAAGACAGGCACACTAACAATGAATCGTGCAATTATGGTTAATCATGTTGACAGCAAAGGGATGCCCCAAGAACAAGTTCTACGCTTTGCATTTCTCAATTCTTACTTCAAGATTGAGCAGAAGTATCCATTGGATGATGCAATTCTTGCATATGTATATACAAATGGATTTAAGTTTCAGCCATCCAAGTGGAGAAAGCTAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTAATCTTAGAAACAAATGAGAGACAGCCACAGTTCTCTGGCAGGTTCATGGTAACAAAAGGAGCATTGTTAGAAGTCATGAGAGTTTGTTCTTACATTGCAAATTCTGACAAAAAAGAAGGAATCTCGATCTTCTCTTCAGATGACTATAATAGAGTTTTAAATCTTTCAGAAGAACTAAGCAATGAGGGATTAAGGGTTATAGCAGTAGCTATAAAGAAACTTGGAGAGGAAGCAAGTAATGGAATAAAGACAAGTGAGGAGGGAGACATGATATTCCTTGGCCTAATAACATTTTTCGACCCACCAAAGGCATCGGCGAAAGAAGCACTGCGGCGTTTGGCAGAAAAAGGAGTTGAAGCAAAGGTTTTAACAGGTGATTCACTGTCATTGGCAACAAGAGTATGCACTGAAGTTGGCATAAGAACCAGTGATGTGATAACAGGGCCAGAGCTAGAGCAACTTGACCAAGAAAGTTTCCATGAGACGGTTCAACGCGCCACGGTGCTAGCACGCCTGACGCCAACTCAGAAACTGAGAGTGGTACAGTCCTTGCAGACAGTTGGAAAGCATGTGGTTGGATTCTTGGGAGATGGTGTGAATGACTCTCTTGCCCTTGATGCTGCGAATGTTAGCATTTCAGTGGACTCAGGTGTAGCCATAGCCAAAGACATGGCAGATATCATCTTACTTGAGAAGGATCTGAATGTGCTGGTTGCAGGAGTAGAGCACGGTAGACTCACCTTTGGCAACACAATGAAGTATGTGAAAATGTCAGTTATTGCAAACCTGGGAGGCGTGATTTCACTGCTCATAGCAATCTTGTTCCTCAAGTATGAGCCCTTAACCTCTAAACAGCTCCTCACACAGAACTTGCTCTACAGCGTGGGACAAATCGCCATCCCCTGGGACAAAATGGACGGAGAGTATGTGAAGAGTCCTCAGAAATGGTCAGAGAAAGGGTTGCCAATGTTCATATTGTGGAATGGGCCAGTTTGCACTCTCTGTGACGTGGCAGCACTCTTGTTCCTTTGGTTCTATTACAATATCGGAGCTGATTTGGATGAGAAGTTCTTCCATTCAGCATGGTTCATTGAGGGCCTCCTCATGCAGACTCTCATCATTCACTTGATCAGAACTGACAAAATTCCTTTCATACAGGACATTGCTTCTTCGCCTGTCATGTGCTCCACGCTTGTCATATCTGCAATTGGAATTGCACTTCCATTCACACCTATTGGGAGAATCATGGAATTCACGCTTCTACCCTTCTCCTATTTCGGATTTTTGCTCATTCTTTTTCTTGGATACTTTGTACTTGGCCAGCTCGTTAAGAGACTTTACATATTGCTTTATAAGAGATGGCTTTGA 2628 0.4212 MGVHKVRKKRECAHGYTLWLTLRNTLPSSLSFTEAERRLKENGPNVPLEYSFPRWWHLLWNSLFHPFNMILIVLSAMSFIACDDANGCIMLILVFISVALRFCQEYSSSKAAMKLSELVRCPVKVQRCAGRVVQRELIVQVDHRDIVPGDIVIFEPGDLFPGDVRLLSSKHLVVSQASLTGESWTTEKTADIREDQSTPLLDLKNICFMGTSVVSGTGTGLVVSTGSNTYMSTMFSKVGKRKPPDDFEKGLKWIFYLLISVMLVLVTIMFLTDYLTSLNLSNSILFAISVASALNPQMLPLIVNTCLAKGALAMAKDKCIVKSLTAIREMGSMDILCIDKTGTLTMNRAIMVNHVDSKGMPQEQVLRFAFLNSYFKIEQKYPLDDAILAYVYTNGFKFQPSKWRKLDEIPFDFIRRRVSVILETNERQPQFSGRFMVTKGALLEVMRVCSYIANSDKKEGISIFSSDDYNRVLNLSEELSNEGLRVIAVAIKKLGEEASNGIKTSEEGDMIFLGLITFFDPPKASAKEALRRLAEKGVEAKVLTGDSLSLATRVCTEVGIRTSDVITGPELEQLDQESFHETVQRATVLARLTPTQKLRVVQSLQTVGKHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIANLGGVISLLIAILFLKYEPLTSKQLLTQNLLYSVGQIAIPWDKMDGEYVKSPQKWSEKGLPMFILWNGPVCTLCDVAALLFLWFYYNIGADLDEKFFHSAWFIEGLLMQTLIIHLIRTDKIPFIQDIASSPVMCSTLVISAIGIALPFTPIGRIMEFTLLPFSYFGFLLILFLGYFVLGQLVKRLYILLYKRWL 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05455 875 Pfam Cation transporter/ATPase, N-terminus 30 78 IPR004014 -
Arst3g05455 875 SFLD Haloacid Dehalogenase 319 665 - -
Arst3g05455 875 SFLD Haloacid Dehalogenase 319 665 - -
Arst3g05455 875 Pfam haloacid dehalogenase-like hydrolase 333 629 - -
Arst3g05455 875 NCBIfam magnesium-translocating P-type ATPase 21 874 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05455 875 PANTHER CATION TRANSPORTING ATPASE 26 865 - -
Arst3g05455 875 Pfam E1-E2 ATPase 131 316 - -
Arst3g05455 875 NCBIfam HAD-IC family P-type ATPase 582 695 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g05455 875 NCBIfam HAD-IC family P-type ATPase 90 384 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g05455 875 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 330 522 IPR023299 GO:0000166
Arst3g05455 875 PRINTS Magnesium-transporting ATPase signature 778 799 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05455 875 PRINTS Magnesium-transporting ATPase signature 723 736 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05455 875 PRINTS Magnesium-transporting ATPase signature 673 688 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05455 875 PRINTS Magnesium-transporting ATPase signature 691 702 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05455 875 PRINTS Magnesium-transporting ATPase signature 743 759 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05455 875 PRINTS Magnesium-transporting ATPase signature 828 849 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05455 875 PRINTS Magnesium-transporting ATPase signature 250 266 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05455 875 PRINTS Magnesium-transporting ATPase signature 371 384 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05455 875 Gene3D - 87 825 - -
Arst3g05455 875 Gene3D - 121 225 - -
Arst3g05455 875 SUPERFAMILY HAD-like 508 663 IPR036412 -
Arst3g05455 875 ProSitePatterns E1-E2 ATPases phosphorylation site. 339 345 IPR018303 -
Arst3g05455 875 SMART Cation_ATPase_N_a_2 12 83 IPR004014 -
Arst3g05455 875 SUPERFAMILY Calcium ATPase, transmembrane domain M 30 872 IPR023298 -
Arst3g05455 875 Gene3D - 349 519 IPR023299 GO:0000166
Arst3g05455 875 Gene3D - 334 652 IPR023214 -
Arst3g05455 875 SFLD p-type atpase 319 665 IPR044492 -
Arst3g05455 875 SFLD p-type atpase 319 665 IPR044492 -
Arst3g05455 875 SUPERFAMILY Calcium ATPase, transduction domain A 131 236 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05455 Arst-Chr3 129190429 129194038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05455 43 771 Primary Pumps ATPases(2) AT1G10130 26.707 1.02e-59 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05455 K01531 - gmx:100795153 1344.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05455 3 129190429 129194038 Arst3g05455 3 129190429 129194038 ECH