Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05437 ACGCCGCCGTCGGGAAACAAGCCGAGATCCCTGCTGCCGCCGCTTCAGCCTCTGGCCATCAGAAGGCGCGGCGCGGAGGAGTGGCCGAGCGCCGGATCTGACGATCTCGGCGTGTGGCCACTCCCGGAGACTCCAAGAGGGTCCGTGTCTGTGGTGGGGTCATCATCGGAGTTCCAGTTGAAGAGGGAGAAGCTGGCCTTCTACGACAAAGAGTGTTCTCGGATTGCGGAGCACGTGTACCTCGGGAGTGACACGGTGGCCAAGAACCATGACCTGCTCCGGCAGAACGGCATCACTCACGTGCTCAACTGTGTTGGCTTCGTTTGCCCTGAATATTTCAAGCGCGATTTTGTTTACAAGACTCTCTGGTTGCAGGACAGTCCCACAGAAGACATCACCAGCATCCTGTACGATGTTTTCGATTACTTTGAGGAGGTTAGGGAGCAAGGTGGGCGCGTGTTGGTTCACTGCTGCCAAGGGGTTTCGAGATCGACCTCTCTGGTGATCGCGTATCTGATGTGGAGGGAAGGGCAGAGCTTCGAGGACGCGTTTCAGTACGTGAAGAATGCGAGGGGTGTCACCAATCCTAACATGGGTTTTGCGTGTCAGTTATTGCAGTGTCAGAAACGGGTACATGCTACTCCCGCTAGTCCTAATTCCATTCTTCGGATGTATAGAATGGCTCCTCATTCACCTTATGATCCTCTTCATTTGGTTCCTAAGATTGTCAACCACCCCTCTGCACAGGCCCTTGATTCTCGTGGTGCTTTCATTGTGCATGTTCCTTCTGCTATTTATGTTTGGACAGGCAACAACTGCAATTCGGTTATGTCTTCTAATGCAAGAGGCGCGGCATCTCAGGTTGTTCGCTATGAGAGGGCTACGGCTCCTGTTCTTACCATCCATGAGTATGACGAGCCACCGGAGTTTTGGATTGCTCTTGCCTCTGCTGATTGTGACCAGCAGGAGAAGGAGGACACAACCTTGGAAGCTGTTCGTCCTAGGAAGCTTGATGAATATGATTTGGATTATGAGATTTTCCAAAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTCTCTGTGTCTAATGCAGGCTCAGAGACCTGCCTTCCGGCCAGAGAAAGCGGTTGGGGGAGACTGCGCCGGAAACTCGCCAGCGGTTTCATCAAAGGATTGTTCACTTCATCCAAAAGGAACTCTACTAATGAAGAAGCTGCTCTTGTCATGGAAGACTTTGCTGTTAATGTTGATCCCAATGATTGCTCAGGCAGGGAAAAAGGTTATGTTGAAGTGTTGGATCATTTCGTTCCTATTACGGATGTGGATTCATCATTGCCAACATCATCAGATTATCTTCCTTGTTTCACGAGCAGCAGTTCCAAGTCACCAACGCTCTCGCCCTCCAGTTCTGATTATGCAAGTTCATTTACATTTTCACCTTCCTCAACAAATTTGTCTTCTCAGCAGCCATCACCTTCTACTTCTAGCATGGATTCAACCGAAACTATTTATGCCAAAGATGCTTCTGTATTGGACAGTTCCTCTCTGTTTCACAAGAAGGGTGATGTGTTTTTGGCTGATCAAACATCCGGAGGGTCCACCTTCTTTTTGCCATTGAAAGGGTCTATACCCTCCATTGCAGAGCGCAGAGGTAGTAATCCACCACCTCGCATGTTGCTACCTTCTTCAGTCACCGAGTCATCCCATCCTCACAGGAGCAAGATTCATGTAAGATCGAAGTCATTCTCTTTGCCGGAATTGGATGATAACTTGTTAAAGGATGTTGATTGCAAGCAAGCTGATCCTGCTTCATGTAAATAA 1821 0.4948 TPPSGNKPRSLLPPLQPLAIRRRGAEEWPSAGSDDLGVWPLPETPRGSVSVVGSSSEFQLKREKLAFYDKECSRIAEHVYLGSDTVAKNHDLLRQNGITHVLNCVGFVCPEYFKRDFVYKTLWLQDSPTEDITSILYDVFDYFEEVREQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKNARGVTNPNMGFACQLLQCQKRVHATPASPNSILRMYRMAPHSPYDPLHLVPKIVNHPSAQALDSRGAFIVHVPSAIYVWTGNNCNSVMSSNARGAASQVVRYERATAPVLTIHEYDEPPEFWIALASADCDQQEKEDTTLEAVRPRKLDEYDLDYEIFQKALAGGVVPPFSVSNAGSETCLPARESGWGRLRRKLASGFIKGLFTSSKRNSTNEEAALVMEDFAVNVDPNDCSGREKGYVEVLDHFVPITDVDSSLPTSSDYLPCFTSSSSKSPTLSPSSSDYASSFTFSPSSTNLSSQQPSPSTSSMDSTETIYAKDASVLDSSSLFHKKGDVFLADQTSGGSTFFLPLKGSIPSIAERRGSNPPPRMLLPSSVTESSHPHRSKIHVRSKSFSLPELDDNLLKDVDCKQADPASCK 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05437 606 SMART dsp_5 71 210 IPR020422 GO:0006470|GO:0008138
Arst3g05437 606 ProSitePatterns Tyrosine specific protein phosphatases active site. 155 165 IPR016130 GO:0016311|GO:0016791
Arst3g05437 606 MobiDBLite consensus disorder prediction 545 580 - -
Arst3g05437 606 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 130 191 IPR000387 GO:0016311|GO:0016791
Arst3g05437 606 CDD DSP 72 206 - -
Arst3g05437 606 Gene3D Severin 223 321 IPR029006 -
Arst3g05437 606 MobiDBLite consensus disorder prediction 480 500 - -
Arst3g05437 606 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 64 212 IPR029021 -
Arst3g05437 606 SUPERFAMILY Actin depolymerizing proteins 217 315 - -
Arst3g05437 606 Pfam Dual specificity phosphatase, catalytic domain 79 209 IPR000340 GO:0008138|GO:0016311
Arst3g05437 606 Gene3D Protein tyrosine phosphatase superfamily 49 213 IPR029021 -
Arst3g05437 606 ProSiteProfiles Dual specificity protein phosphatase domain profile. 71 213 IPR020422 GO:0006470|GO:0008138
Arst3g05437 606 PANTHER MKPA PROTEIN 6 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05437 Arst-Chr3 129090832 129092905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05437 1 107 Protein tyrosine phosphatase (PTP) family AT3G55270 51.639 7.08e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05437 - - lja:Lj6g3v0574850.1 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05437 3 129090832 129092905 Arst3g05437 3 129090832 129092905 ECH
Arst3g05437 3 129090832 129092905 Arst10g01045 10 10529566 10532390 PCT