Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05390 ATGGATTTTTTCATGCAATCTTTATTTCTAATTATGATCACCTTAGTTATATCCATCTTTGTTCTGAACAGAAAAAATCTTGATGCCACCAAAACCCTGCCCCAAGGTAGTTTTGGATGGCCTATAGTGAATGAAACCTACCAATTTCTGTTCAAACAAATTGATCATTTCCTTCAAGAGAAACAGAAAAAGCACTCCTCAGATATCTTCAAGACCAAGTTACTAGGAGAACCAACAGTGGTTCTTTATGGTCCTAGTGCAAACAAATTTATCTCCACCAATGAACCAAAACATGTCAAAGTTTGGTACTTGAGGACACAAAGAATGCTCTTCAATCTTCCTGATCATGATCAGCTGCGTGCGAAAAACTCGGCCGTTGTAGCTGCGGCTCCAGTGAAGATCTTAGGGTTCTTGAAACCAGAAGGTCTATTTAGGTACATGGGGTGCAACATTGAATCCATCATGCACCAACACTTCATGAGAAATTGGGAAGGAAAAACAGAACTAAAGGTTTATCCTTTGGTGAAAAATTTTGCTCTTTCACTGGCCTATCAGTTCTACTTAGGAATTGATGATCCACTCCATGTGGCAAAATTTATCAGCAAGTTTGATGATTTGTATTCTGGAATTTATGCTGTTCCGGCGAATTTTCCGGGGACTACATTTCACAGGGCAATGAAGGCTGCAAGTAAAATCAGAGAAGAGATTCAATTATTGATCAATAAGAAGATTGATTATTTGTCAAAGGGAATTGTTATGAATGATTTACTAGCACATTTAGTTGGTGCTGTTGAGGATGGAAAATATGTGCCAAAAATTGAAATAAGTAACATCATAATGGGATTGATGAATTCTAGCTACACATCAATAGCAATCACACTTGCTTTCATGATCAAACACATTGGATTGGATCCTCATATCTACCAAAAAATTGTATCAGAGCATGCTGATATTACAAAATCAAAAGGAGCAGGTGCAGCACTAGATTGGGACAGCATACAAAAAATGAAATACACATGGTGTGTTACACAAGAAACCATGAGACTGTACCCAACTGCACCAGGAGCATTCAGAGAGGCAGTAACAGATATCACCTTTGAAGGTTTTACTATTCCAAAGGGATGGAAGATATTTTGGGCAATGATGGGAACAAATAAGAACTCAAAATACTTTGATGAGGCTGAAAGTTTTGATCCATCAAGATTTGAAGAGAATGGCCCTGTTCCATACAGTTATATACCATTTGGTGCTGGAGCAAGGTCTTGCCCCGGAAAGGATTACACAAGGTTTGTGATTCTCACTTTCATTCACAATCTCGTTACCAAATTCAGTTGGCAAGTTATGCATCCTCATGAGCAAGTCTTAGGTTCTTTGGTGCCTCTTCCGGCGAATGGAATTCCCATCCGAATTCGCCACCTCTAA 1422 0.3875 MDFFMQSLFLIMITLVISIFVLNRKNLDATKTLPQGSFGWPIVNETYQFLFKQIDHFLQEKQKKHSSDIFKTKLLGEPTVVLYGPSANKFISTNEPKHVKVWYLRTQRMLFNLPDHDQLRAKNSAVVAAAPVKILGFLKPEGLFRYMGCNIESIMHQHFMRNWEGKTELKVYPLVKNFALSLAYQFYLGIDDPLHVAKFISKFDDLYSGIYAVPANFPGTTFHRAMKAASKIREEIQLLINKKIDYLSKGIVMNDLLAHLVGAVEDGKYVPKIEISNIIMGLMNSSYTSIAITLAFMIKHIGLDPHIYQKIVSEHADITKSKGAGAALDWDSIQKMKYTWCVTQETMRLYPTAPGAFREAVTDITFEGFTIPKGWKIFWAMMGTNKNSKYFDEAESFDPSRFEENGPVPYSYIPFGAGARSCPGKDYTRFVILTFIHNLVTKFSWQVMHPHEQVLGSLVPLPANGIPIRIRHL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05390 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Arst3g05390 473 SUPERFAMILY Cytochrome P450 32 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst3g05390 473 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst3g05390 473 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst3g05390 473 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst3g05390 473 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst3g05390 473 Gene3D Cytochrome P450 23 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst3g05390 473 CDD CYP90-like 62 470 - -
Arst3g05390 473 Pfam Cytochrome P450 34 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst3g05390 473 PANTHER CYTOCHROME P450 26 31 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05390 Arst-Chr3 128813663 128815548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05390 1 445 Cytochrome P450 AT4G19230 31.126 9.90e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05390 K20667 - tpra:123917065 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05390 3 128813663 128815548 Arst3g05390 3 128813663 128815548 ECH