Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05376 ATGAAACCTGTTTTTGTGCTTCTCCTAATCTTTCTTGTGGCTCCTACAAGGCCATTCTCATCATCATCATCATCATCATCATCATCATCTCCCACCATTTCCCATAGCAGCAACAACTCTGTATGCCCAGTGGGAATGGATTATGTGCTGACAGTCCCATGGAACTCCTCTAGCTGCCATAACTTCCAACCTTTCCCATCCAAAAACAAAACACGTTCAAGTTTTTGTTGCACTGCTCTGTTATCCCTCTTTGGCATAGCACTTGCTCAAAACCTCAAAGAAAACTCCCTTTTCCAGTTCCCGAATCTTCCCACCATAAAATCCTGCCTTCATCACTTCCAATCCAAGCTCAGTGCTCTCTCACTTCCAAACAACCTTGTTTCCTCTTGTTTTGACCCGCTTCAATTTGTTATCAGTCCCAACCTATGCGCTAACATCCAATCTAAGCAAGACTGGATCAACAATCTTGGTCCTACAACTCGGTTCAACGATGCCTGTAAGCCAGACCTCAGTGTCTCTGCCAACTGCGACATTTGTGTCACAGAAGGTCTAAATGTTCTGCAAAAGATGAATGCTATTGATGGAAATGCTTCTCATTCCCAAGACTGTTTTTATTTTTCAATTCTATATGCTGCTGGAATCGCAAACGAGCTTGGCCCTGAAAGCAGAGGTGCTATGTCTTGTATTTATGAGTTGCCACTTATTAGTGATCAAGGGAGAGGTGCCAGAAGAAGGAGCCATAATCATGCTCTTGTATTTGGTTTAATTGGAGCTTCAATTGGAATCTTGGTTGTGTCTTCCTTGATAGGTTTGTGTCTATGGTACAACAGGTTGGGGACGAGAAAAGCTGCTGAGAATTTGTATGTCTGTGCTGAACTGACAGTGCAAGGGTCTAGGACTCGAGTGAGACCAAATACAGGGTCAACTTGGTTCAAGTTTGAGGACCTAGTGAAGGCCACTAACAATTTTTCAACCCAGAACTTCATTGGCAGAGGTGGTTCTGGCTTAGTTTACAAGGGCATTCTACCTGATGGCACAATCGTTGCAGTTAAAAGGATAGAAGAATCGGATTCTCAAGGAGATGAAGAATTCTACAGGGAGGTGGAGATTATTAGCAACTTGAAACACCGGAATCTAGTGCTGCTAAGAGGGTGTTGTGTGGTTGATAAAGAAGAAGAGGAGGATTCCGGGTACAGAGAAAGCCAAAGATATCTTGTTTATGATTACATGCCAAATGGTAGCCTTGAAGACCATCTCTTCTCTTCCATGGACAACCGAAATATGAAGAAATCACTTACTTGGTCTCAAAGAAAGAGCATAATCTTGGATGTGGCAAATGGGTTGGTCTATTTGCACTTTGGAGTTAAACCTGCAATCTATCACAGAGATATCAAAACCACCAATATTCTGCTTGATGCAGGTATGAATGCAAGAGTTGCGGATTTCGGGTTGGCTAAACAAAACATTGAAAGTAGGTCTCTGATAAATACAAGAGTTGCTGGAACTCATGGGTACCTGGCACCAGAATATGCACTTTATGGCCAATTATCTGAAAAGAGTGATGTCTATAGTTTTGGTGTGGTTATACTGGAAATATTGTGTGGAAGAAAAGCTCTTGATTTATCTTCATCTGGAACATCTGCATTCTTTATCTCAGATTGGGTTTGGTCATTGCTGAAATCTGGTAACTTAGAATCAGCTTTGGATGCTTCTATGTTAATAGATGAAAACCTTACTAGTAGGAAAATAATAGAAAGATTCTTAATGGTTGGTGTTCTGTCTTCTCATGTAGTAGCTGATTCAAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGGGATATTGAGATTCCACCAATTCCAGATAGGCCAATGGCTCTTGCACACCATGTTTTTCCCATAGTTATTTAG 1914 0.4143 MKPVFVLLLIFLVAPTRPFSSSSSSSSSSSPTISHSSNNSVCPVGMDYVLTVPWNSSSCHNFQPFPSKNKTRSSFCCTALLSLFGIALAQNLKENSLFQFPNLPTIKSCLHHFQSKLSALSLPNNLVSSCFDPLQFVISPNLCANIQSKQDWINNLGPTTRFNDACKPDLSVSANCDICVTEGLNVLQKMNAIDGNASHSQDCFYFSILYAAGIANELGPESRGAMSCIYELPLISDQGRGARRRSHNHALVFGLIGASIGILVVSSLIGLCLWYNRLGTRKAAENLYVCAELTVQGSRTRVRPNTGSTWFKFEDLVKATNNFSTQNFIGRGGSGLVYKGILPDGTIVAVKRIEESDSQGDEEFYREVEIISNLKHRNLVLLRGCCVVDKEEEEDSGYRESQRYLVYDYMPNGSLEDHLFSSMDNRNMKKSLTWSQRKSIILDVANGLVYLHFGVKPAIYHRDIKTTNILLDAGMNARVADFGLAKQNIESRSLINTRVAGTHGYLAPEYALYGQLSEKSDVYSFGVVILEILCGRKALDLSSSGTSAFFISDWVWSLLKSGNLESALDASMLIDENLTSRKIIERFLMVGVLSSHVVADSRPTILDALKMLEGDIEIPPIPDRPMALAHHVFPIVI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05376 637 Gene3D Phosphorylase Kinase; domain 1 290 409 - -
Arst3g05376 637 SMART serkin_6 323 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05376 637 SUPERFAMILY Protein kinase-like (PK-like) 301 613 IPR011009 -
Arst3g05376 637 ProSiteProfiles Protein kinase domain profile. 323 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05376 637 FunFam Receptor-like serine/threonine-protein kinase At4g25390 289 409 - -
Arst3g05376 637 Pfam SPARK 37 204 IPR043891 -
Arst3g05376 637 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 410 620 - -
Arst3g05376 637 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Arst3g05376 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Arst3g05376 637 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 626 - -
Arst3g05376 637 MobiDBLite consensus disorder prediction 18 38 - -
Arst3g05376 637 Pfam Protein kinase domain 325 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05376 637 Gene3D Transferase(Phosphotransferase) domain 1 410 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05376 Arst-Chr3 128715093 128717404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05376 37 630 Receptor kinase-like Gene Family AT1G11050 57.860 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Arst3g05376 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05376 - - gmx:100788367 798.505