Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05372 ATGGATAATAATAATAATATCAAGAAAGAACAAGTTTTCTTACATGGTGACTTGGATATTTATGTAATAGAAGCAAAATCTCTTCCAAACTTGGATCTTTCTTCAGAAGCAGTAAGAAGATGCCTGAGCATGGGGAACTTCTTCACATCACCATTCTCAAAGAAAATGAGGAGTTCAGGGAAAGATAAGATGATAACAAGTGACCCTTATGTCTCTGTAGTCATAGCAGGTGCTACCATAGCTCAAACTAGAGTGATTCCAAACAGCGAAAACCCGATTTGGGACGAGCATTTCATCATGCCGGTTGCTCACCCTGCTCACAAGATTGAGTTCATTGTGAAGGACAATGATGTTCTTGGTGCTGAGTTAATTGGTGTAGTTGATATTCCTGTTCAGAGGGTAGTCTCAGGGGAAAACATAGATGATTGGTTTCCAATCATCGGACAGTACTCTAATTGCTTGCAGGCTTATCCTGAGCTGCATATTTCGATTCAGTTTTGGCCGGTCGGAGGCGTTAAGGATGATATTTGTAGTGGTGATAGTGGAGTTCCTAAGACATATTTTCCATTGAGGAAAGGAGGGAATGTGACTCTGTATCAAGATGCACATGTTCCTGATGGAATGCTACCTGATATTGAATTGGATGGTGGAAAAGTGTTTCAAGCTGGTAAATGTTGGGAGGATATTTGCCATGCAATTTTGGAAGCTCATCATTTGATATATGTTATTGGTTGGTCAGTTTATCATCCAATAAAGCTTGTTAGAGAGCCAACAAGGCCATTGCCTTGTGGTGGAGAGCTTTCACTTGGAGAGTTGTTGAAGTACAAATCACAAGAAGGTCTTAGAGTTGTTATGCTCATTTGGGATGACAGAACTTCACATGACAAGTTCCTTATCAAAACTGATGGAGTGATGCAAACTCATGATGAGGAAACCAAAAAGTTCTTTAAAAACTCTGCTGTTCATTGCGTGCTATCTCCGCGTTATGCAAGCAATAAGCTCAGTATTTTCAAGCAACAGGTTGTGGGAACCCTCTTTACTCATCATCAGAAATGTGTGCTTGTGGACTCACAAGGTGCAGGGAATAATCGGAAAATATCTGCTTTTATTGGTGGTCTGGATCTCTGTGATGGCAGATATGATACACCTCAGCATAGGCTATTTCGCGATTTAGAAACCGTTTACAAAGAGGATTTTCATAATCCTACATTTCAAGTAGGTTCTAGTGGAGGTGGACCAAGAGAGCCATGGCATGACATGCATTGCAAGGTTGAAGGGCCAGCAGCTTATGATATATTAACCAATTTTGAACAAAGATGGAGGAAAGCCAAAAAATGGCGAGACTTTAGACTCAACAAGGTCACGAATTGGCACGACGATGCATTGCTAAGGCTAGATCGGATATCATGGATTGTCAGTCCATCTTCGAGTTCTGGTGATGATAAAGCTATCCAGGTGACCGACGAAAATGATCCTGAAACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCAGTGAAGGGTTTTCCAAAGGATTTCGACAAGGCTCAGTCTCAGAATCTTTTATGTGGAAAGAATTTAAAAGTAGACCAAAGCATTCATACTGCTTATGTTAAAGCAATAAGATCAGCCCAACACTTCATTTATATTGAGAATCAGTATTTTCTGGGCTCATCATATCATTGGCCTTCATATGAAAAAGCAGGTGCAAACCACTTGATTCCAATGGAGTTGGCCTTAAAAATTTCTAGCAAGATCCGAGCAAATGAACGTTTTGCTGTATACATAGTTATACCAATGTGGCCAGAGGGGGTTCCAACAAGTAATGCTGTTCAGGAAATCTTATTCTGGCAGGGACAAACAATGGCTATGATGTATAAGATCATTGCAGATGCACTTAAAGATGCTCAAGTCTCCCATATATATCATCCACATGATTTTCTCAACTTTTTCTGCCTTGGAAATAGAGAACCTGAGGCCACACCAACTCCATCACCACATAGAGAATCATCTGAAAACCGTGGTTTGGGATCAGTCAAGAAATTCAAACGTTTCATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATCAATACGTAATCATTGGATCAGCAAACATTAACCAGAGATCAATGGATGGTTCAAGAGACACAGAAATAGCCATGGGTGCTTATCAACCAAAATATACTTGGAAAGAAAAAAACTGGCATCCACATGGCCAGGTGTATGGATACCGGATGTGGCTGTGGGCCGAGCACCTTGGCAGTCTTGATGACAGATTCAAAGAGCCTCATAGCTTGGAATGTGTAAGGACTATGAACAACATAGCCAAACAAAACTGGAACACATTTGCATCCGATAGAATCAGTCATATGAAAGGGCACTTGATGCTGTATCCAGTTAAGGTTGGCAGAGATGGAAAAGTCACTGCACTTGATAATTGTGATTCATTTCCTGATGTTGGTGGCAAAATTCTTGGAGCTGCAAATTCTCTTCCAGACACCTTAACCACATGA 2526 0.4062 MDNNNNIKKEQVFLHGDLDIYVIEAKSLPNLDLSSEAVRRCLSMGNFFTSPFSKKMRSSGKDKMITSDPYVSVVIAGATIAQTRVIPNSENPIWDEHFIMPVAHPAHKIEFIVKDNDVLGAELIGVVDIPVQRVVSGENIDDWFPIIGQYSNCLQAYPELHISIQFWPVGGVKDDICSGDSGVPKTYFPLRKGGNVTLYQDAHVPDGMLPDIELDGGKVFQAGKCWEDICHAILEAHHLIYVIGWSVYHPIKLVREPTRPLPCGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLIKTDGVMQTHDEETKKFFKNSAVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCVLVDSQGAGNNRKISAFIGGLDLCDGRYDTPQHRLFRDLETVYKEDFHNPTFQVGSSGGGPREPWHDMHCKVEGPAAYDILTNFEQRWRKAKKWRDFRLNKVTNWHDDALLRLDRISWIVSPSSSSGDDKAIQVTDENDPETWNVQVFRSIDSGSVKGFPKDFDKAQSQNLLCGKNLKVDQSIHTAYVKAIRSAQHFIYIENQYFLGSSYHWPSYEKAGANHLIPMELALKISSKIRANERFAVYIVIPMWPEGVPTSNAVQEILFWQGQTMAMMYKIIADALKDAQVSHIYHPHDFLNFFCLGNREPEATPTPSPHRESSENRGLGSVKKFKRFMIYVHAKGMIVDDQYVIIGSANINQRSMDGSRDTEIAMGAYQPKYTWKEKNWHPHGQVYGYRMWLWAEHLGSLDDRFKEPHSLECVRTMNNIAKQNWNTFASDRISHMKGHLMLYPVKVGRDGKVTALDNCDSFPDVGGKILGAANSLPDTLTT 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05372 841 Gene3D C2 domain 12 166 IPR035892 -
Arst3g05372 841 Gene3D Endonuclease Chain A 218 462 - -
Arst3g05372 841 Pfam Phospholipase D Active site motif 345 379 IPR001736 GO:0003824
Arst3g05372 841 PANTHER PHOSPHOLIPASE D 9 830 IPR015679 -
Arst3g05372 841 SMART C2_3c 17 143 IPR000008 -
Arst3g05372 841 PANTHER PHOSPHOLIPASE D 9 830 IPR015679 -
Arst3g05372 841 ProSiteProfiles C2 domain profile. 1 144 IPR000008 -
Arst3g05372 841 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 687 714 IPR001736 GO:0003824
Arst3g05372 841 PIRSF PLD_plant 3 841 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst3g05372 841 PIRSF PLD_plant 3 841 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst3g05372 841 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 344 379 IPR001736 GO:0003824
Arst3g05372 841 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 169 IPR035892 -
Arst3g05372 841 FunFam Phospholipase D delta 216 461 - -
Arst3g05372 841 Pfam Phospholipase D C terminal 761 831 IPR024632 -
Arst3g05372 841 SMART pld_4 687 714 IPR001736 GO:0003824
Arst3g05372 841 SMART pld_4 344 379 IPR001736 GO:0003824
Arst3g05372 841 CDD C2_plant_PLD 12 166 - -
Arst3g05372 841 Pfam C2 domain 16 146 IPR000008 -
Arst3g05372 841 SUPERFAMILY Phospholipase D/nuclease 533 772 - -
Arst3g05372 841 Gene3D Endonuclease Chain A 492 744 - -
Arst3g05372 841 Pfam PLD-like domain 629 723 IPR025202 -
Arst3g05372 841 SUPERFAMILY Phospholipase D/nuclease 183 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05372 Arst-Chr3 128657923 128662446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05372 12 840 Phospholipase D Gene Family (Wang group) AT2G42010 54.070 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05372 K01115 - gmx:100779740 1389.02