Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05366 ATGTTGGACATGTATTACGCTAACGATCGGCGCAATGTTCCTGCCAGGGTTCCCCAAGATGTTGTAGCCACTGGGGGGAAATGCATGCTCTTAAGATGGGTTAGAGAGGATGCCTTGAAGGCATTGCAGGAAAAGGAAAAAGAACCGGCTGTACCTGAACCGGAACCAGAGCCAACTACTGAAGTGCTTTTTCTTTGCAGCTATGAAGGATGTGGAAAGACGTTCATTGATGCCGGTGCATTGAGGAAACATTCTCACATTCATGGAGAGAGACAATTTGTTTGTCACTATGAGGGGTGCGGAAAGAAATTTCTTGATAGCTCAAAGTTGAAAAGACATTTTCTCATTCACACAGGGGAGAGGGATTTTGTGTGTCCCCATGAAGGCTGTGGTAAGGCCTTCTCTCTGGATTTCAACTTAAGGTCTCACATGAAAACACATTCACAAGAGAACTATCATATCTGTCCGTACTCAGAATGCGGAAAGAGATATGCTCATGAATACAAGCTAAAGAATCACATTGCCTCTCACCATGAAAAGAATGCAGCACTGGAGGTGCCGAAGTATACTCCGCCTTTAGAGAGACAACCAAAAACTACTAAACATTCTGGCACAGCATATGGTTCTGCATCGTCAGATCGCCCCTATGCATGCCCTTATGAAGGATGTGAAAAAGCCTACATTCATGAATACAAGCTTAAACTCCATTTGAAGAGGGAACATCCTGGGCATATGTCTGATGAAAATGCAGAGCATGCTCAAGCTAATCTTGATAATGAAATGGATGAAGCAAGCGATCAAGATGCCTATGGTGGCAAACGGTCAAATGGTAAAATTCAGAAGCAAAGTAAGCTAAAACCAAACCTTAAGTTGCCTCCTTCCAAAATCACCAAACGCAAAGCACCGCCACCTACTCCTGCCACCATAGCCGTAACAAAGAAACCTTGGTCTGTGAATGTGAGAGAGGAGGCTTACAACGAAGAAGACAGCGAAGAAACAGAAGAGGAGGATCGCGACAATGTTGAAGATGGTTGGAGATATGCTGGCAACAATGACGACGATGATGAAGAAACAGAATATGAAGACTGA 1089 0.4408 MLDMYYANDRRNVPARVPQDVVATGGKCMLLRWVREDALKALQEKEKEPAVPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYSECGKRYAHEYKLKNHIASHHEKNAALEVPKYTPPLERQPKTTKHSGTAYGSASSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAEHAQANLDNEMDEASDQDAYGGKRSNGKIQKQSKLKPNLKLPPSKITKRKAPPPTPATIAVTKKPWSVNVREEAYNEEDSEETEEEDRDNVEDGWRYAGNNDDDDEETEYED 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05366 362 FunFam zinc finger transcription factor YY1 150 181 - -
Arst3g05366 362 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 15 346 - -
Arst3g05366 362 MobiDBLite consensus disorder prediction 179 213 - -
Arst3g05366 362 Gene3D Classic Zinc Finger 90 120 - -
Arst3g05366 362 Gene3D Classic Zinc Finger 150 182 - -
Arst3g05366 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 122 IPR013087 -
Arst3g05366 362 Gene3D Classic Zinc Finger 121 148 - -
Arst3g05366 362 Gene3D Classic Zinc Finger 64 89 - -
Arst3g05366 362 Coils Coil 247 267 - -
Arst3g05366 362 FunFam Zinc finger protein 410 121 148 - -
Arst3g05366 362 ProSitePatterns Zinc finger C2H2 type domain signature. 155 178 IPR013087 -
Arst3g05366 362 ProSitePatterns Zinc finger C2H2 type domain signature. 95 117 IPR013087 -
Arst3g05366 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 123 152 IPR013087 -
Arst3g05366 362 SMART c2h2final6 123 147 IPR013087 -
Arst3g05366 362 SMART c2h2final6 64 88 IPR013087 -
Arst3g05366 362 SMART c2h2final6 93 117 IPR013087 -
Arst3g05366 362 SMART c2h2final6 153 177 IPR013087 -
Arst3g05366 362 SMART c2h2final6 216 241 IPR013087 -
Arst3g05366 362 SUPERFAMILY beta-beta-alpha zinc fingers 104 156 IPR036236 -
Arst3g05366 362 ProSitePatterns Zinc finger C2H2 type domain signature. 66 88 IPR013087 -
Arst3g05366 362 FunFam Putative zinc finger protein 143 90 120 - -
Arst3g05366 362 Pfam Zinc finger, C2H2 type 123 147 IPR013087 -
Arst3g05366 362 FunFam Zinc finger transcription factor YY1 191 258 - -
Arst3g05366 362 ProSitePatterns Zinc finger C2H2 type domain signature. 125 147 IPR013087 -
Arst3g05366 362 MobiDBLite consensus disorder prediction 325 339 - -
Arst3g05366 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 216 246 IPR013087 -
Arst3g05366 362 MobiDBLite consensus disorder prediction 196 210 - -
Arst3g05366 362 FunFam zinc finger transcription factor YY1 64 89 - -
Arst3g05366 362 ProSitePatterns Zinc finger C2H2 type domain signature. 218 241 IPR013087 -
Arst3g05366 362 Gene3D Classic Zinc Finger 193 258 - -
Arst3g05366 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 153 182 IPR013087 -
Arst3g05366 362 SUPERFAMILY beta-beta-alpha zinc fingers 67 117 IPR036236 -
Arst3g05366 362 MobiDBLite consensus disorder prediction 261 362 - -
Arst3g05366 362 SUPERFAMILY beta-beta-alpha zinc fingers 211 239 IPR036236 -
Arst3g05366 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 93 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05366 Arst-Chr3 128626976 128629500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05366 17 348 C2H2 Transcription Factor Family AT4G06634 64.451 2.36e-135 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst3g05366 zf-C2H2 0.00036 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05366 - - zju:107412546 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05366 3 128626976 128629500 Arst3g05366 3 128626976 128629500 ECH