Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05362 ATGGAGAGCATTGCCGCGCAGCTGAAGCGCGGCATATCGCGGCAATTTTCGTCGGGTTCGCTTCGTCGGAACATGAGCCGCCAGTTCACGAGACAGGCGTCGCTGGACCCTCGCCGGAACAATCTCAGGTTCAGCTTCGGGAGGCAGTCGTCGCTCGACCCGATCCGGCGAAGTCCGGTGACGCCGAGGGACGGGGAGGACGACCAAGAGCTCACGGTTCCGGACAACCTCGATTCCACCATGCAGCTTCTGTTCATGGCGTGCAGAGGTGACGTTAAGGGCGTTGAGGACCTCCTCAACGATGGCATCGATGTAAATAGCATCGATCTCGATGGACGCACTGCGCTTCACATCGCCGCTTGTGAGGGCCACGTTGAGGTCTGCGCTCTCCTTCTCAGCCGCAAGGCTAACATCGACGCTCGGGATCGCTGGGGCAGCACGGCAGCGGCTGACGCCAAATATTATGGAAATACAGAAGTTTATTATATGCTGAAGGCCCGTGGAGCAAAAGTGCCGAAAACCAGGAAAACTCCAATGACTGTTACAAATCCTCGTGAGGTTCCAGAATATGAACTCAATCCCTTAGAACTCCAGGTTCGGAAGAGTGATGGAATTTCAAAGGGGGTATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCAGTGAAGATACTAGATAAGGACAGTTATTCAGATCCTGATAGCATAAATGCCTTCAAGCATGAGCTCACGTTATTAGAAAGGGTACGGCATCCTAATGTGGTCCAATTTGTTGGAGCTGTCACTCAAAATGTACCAATGATGATTGTGAGAGAGTACCATGCTAAGGGTGACCTTGCAAGCTATATTCAGAAGAAAGGCCGGCTTTCCCTATCAAAAGTTCTACGGTTTTCTCTTGATATTGCTAGGGGAATGAACTATCTTCATGAATGCAAACCAGAACCAGTTCTCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGTCAACTAAAGATAGCTGGGTTTGGAAATGTGAGATTATCGCATATCTCACCTGATAAAGCAAAGCTGGCAGAGCCTGTCTCCAACATTGACCTTTTAAGCGTGTACTTGGCTCCAGAGATTTACAAAGATGAAGTATTTGACAGAAGCGTGGACGCATATTCTTTTGGTCTCATCTTATATGAGATGATTGAGGGTGTACAGCCCTTCCATCACCACTCTGCGGATGAGGCCTTGAGAATGATGTGCCTAGAAGGGAATAGACCACCATTCAAGGTCAAAGCAAAACATTATCCTCCGGATTTGAAAGAGTTGATTGAGGAATGTTGGGATCGAGAACCTGTTGTCAGGCCAACATTTTCCCAGGTCATTGTACGGTTGGATAAAATTGTTTCAAATGGTTCGAAACACGGATGGTGGAAAGATACTTTTAAACTTCCTTGGAAATAA 1443 0.4761 MESIAAQLKRGISRQFSSGSLRRNMSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSPVTPRDGEDDQELTVPDNLDSTMQLLFMACRGDVKGVEDLLNDGIDVNSIDLDGRTALHIAACEGHVEVCALLLSRKANIDARDRWGSTAAADAKYYGNTEVYYMLKARGAKVPKTRKTPMTVTNPREVPEYELNPLELQVRKSDGISKGVYQVAKWNGTKVAVKILDKDSYSDPDSINAFKHELTLLERVRHPNVVQFVGAVTQNVPMMIVREYHAKGDLASYIQKKGRLSLSKVLRFSLDIARGMNYLHECKPEPVLHCDLKPKNILLDNGGQLKIAGFGNVRLSHISPDKAKLAEPVSNIDLLSVYLAPEIYKDEVFDRSVDAYSFGLILYEMIEGVQPFHHHSADEALRMMCLEGNRPPFKVKAKHYPPDLKELIEECWDREPVVRPTFSQVIVRLDKIVSNGSKHGWWKDTFKLPWK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05362 480 ProSiteProfiles Ankyrin repeat region circular profile. 111 143 - -
Arst3g05362 480 SMART serkin_6 199 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05362 480 Gene3D Transferase(Phosphotransferase) domain 1 275 474 - -
Arst3g05362 480 CDD STKc_MAP3K-like 205 458 - -
Arst3g05362 480 SUPERFAMILY Protein kinase-like (PK-like) 208 458 IPR011009 -
Arst3g05362 480 FunFam Integrin-linked protein kinase family 275 474 - -
Arst3g05362 480 Pfam Protein tyrosine and serine/threonine kinase 207 457 IPR001245 GO:0004672|GO:0006468
Arst3g05362 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Arst3g05362 480 ProSiteProfiles Ankyrin repeat profile. 111 143 IPR002110 GO:0005515
Arst3g05362 480 PIRSF ILK 8 479 - -
Arst3g05362 480 Gene3D Phosphorylase Kinase; domain 1 192 274 - -
Arst3g05362 480 ProSiteProfiles Protein kinase domain profile. 195 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05362 480 Pfam Ankyrin repeats (3 copies) 86 171 IPR002110 GO:0005515
Arst3g05362 480 MobiDBLite consensus disorder prediction 52 73 - -
Arst3g05362 480 FunFam Integrin-linked protein kinase 1 47 190 - -
Arst3g05362 480 SUPERFAMILY Ankyrin repeat 81 178 IPR036770 -
Arst3g05362 480 Gene3D - 55 190 IPR036770 -
Arst3g05362 480 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 148 461 - -
Arst3g05362 480 SMART ANK_2a 111 140 IPR002110 GO:0005515
Arst3g05362 480 SMART ANK_2a 79 107 IPR002110 GO:0005515
Arst3g05362 480 FunFam serine/threonine-protein kinase STY46-like 192 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05362 Arst-Chr3 128593086 128598556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05362 1 479 MAP Kinase Kinase Kinase AT2G43850 75.992 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Arst3g05362 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05362 - - gmx:100810411 854.744