Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05326 ATGGATATCGAGGAAGACATCCGTTCTTTGCAGCTTGACTCAGCAGCAGAAGACAATAATGGGGTGGTAATTCCAGATGATGTAAAGCCAGAAGAAGTTGATAAATCTGAAAAGATTGAAGAAATTGAGAAATCTAATGAGATGGATGAAGATCCAAAGCAGGAGGTTCAGGCACAGCCTAACCAGGCTGAGCCAACAGTGAGAAATAGAGAAATTCATCCTGTACAAGATCAAGAAGATGAGCTTGACAACCGAAAAAGGCACTTGAATGTTGTATTCATTGGCCATGTTGATGCTGGTAAGTCAACAACCGGAGGCCAGATACTTTTCCTCAGTGGTCAGGTTGATGAAAGGACTATACAGAAATATGAGAAAGAAGCTAAAGATAAAAGTCGAGAAAGCTGGTATATGGCTTATATAATGGACACAAATGAGGAGGAGAGAGTGAAGGGAAAAACAGTTGAAGTTGGAAGAGCTCATTTTGAGACAGAGTCAACACGGTTTACAATTTTGGATGCACCTGGTCATAAAAGCTATGTTCCTAACATGATTAGTGGTGCATCTCAAGCTGATGTTGGAGTGTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGACTAAGCTGCTTGTTGTTGTAAATAAAATGGATGATCCAACTGTGAATTGGGCAAAAGAAAGGTATGATGAGATTGAGTCAAAGATGATTCCATTTTTGAGACAATCAGGATACAATGTGAAGAAAGATGTCATGTTTTTGCCAATATCTGGTCTGATTGGCACCAACTTGCAAACAAGAGTGGATAAAAGCATTTGCTCATGGTGGGATGGCCCTTGCTTATTTGAAGCGCTTGATGCTGTTGAAGTTCCTCTACGAGACCCCAATGGTCCTTTCAGGATGCCTATACTTGATAAATTCAAAGACATGGGAACTGTCGTTATGGGGAAAGTGGAATTTGGCAGTGTCCGTGAGGGAGATTCCTTGTTGGTCATGCCAAATAAGGATCAAGTTAAAGTTGTTGCTGTATTCATTGATGAAAATCGGGTTAGGCGTGCAGGACCTGGTGAAAATTTACGGATTAGGTTATCAGGTGTTGAAGAGGAGGATATATTATCTGGGTTTGTTCTGTCTAGTGTTGCAAATCCAGTGCCAACTGTTACTGAGTTTGTTGCTCAGCTGCAAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTATTGCATATACACTCTGTTGTTGAAGAATGTGAAATTGTTGAGCTGTTACAGCAAATAGATCCAAAGACAAAGAAACCAATGAAAAAGAAAGTGCTATTTGTGAAGAATGGTGCTGTTGTTGTGTGCCGTGTTCAGGTTAGTAACACGATATGTGTTGAGAAGTTTTCTGATTTTCCGCAACTAGGGAGATTCACTCTTCGCAGTGAAGGAAAAACTGTTGCGGTTGGGAAAGTCACTGGTGTGTGA 1539 0.4094 MDIEEDIRSLQLDSAAEDNNGVVIPDDVKPEEVDKSEKIEEIEKSNEMDEDPKQEVQAQPNQAEPTVRNREIHPVQDQEDELDNRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADVGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWAKERYDEIESKMIPFLRQSGYNVKKDVMFLPISGLIGTNLQTRVDKSICSWWDGPCLFEALDAVEVPLRDPNGPFRMPILDKFKDMGTVVMGKVEFGSVREGDSLLVMPNKDQVKVVAVFIDENRVRRAGPGENLRIRLSGVEEEDILSGFVLSSVANPVPTVTEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQVSNTICVEKFSDFPQLGRFTLRSEGKTVAVGKVTGV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05326 512 Gene3D Translation factors 315 400 - -
Arst3g05326 512 Pfam Elongation factor Tu GTP binding domain 86 292 IPR000795 GO:0003924|GO:0005525
Arst3g05326 512 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 406 511 IPR009001 -
Arst3g05326 512 CDD EF1_alpha 90 310 - -
Arst3g05326 512 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 314 400 - -
Arst3g05326 512 SUPERFAMILY Translation proteins 309 402 IPR009000 -
Arst3g05326 512 MobiDBLite consensus disorder prediction 1 73 - -
Arst3g05326 512 MobiDBLite consensus disorder prediction 24 54 - -
Arst3g05326 512 Pfam Elongation factor Tu C-terminal domain 403 512 IPR004160 -
Arst3g05326 512 CDD eRF3_II 317 398 - -
Arst3g05326 512 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 142 157 IPR031157 -
Arst3g05326 512 Gene3D - 68 310 IPR027417 -
Arst3g05326 512 Gene3D Translation factors 405 512 - -
Arst3g05326 512 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 67 310 - -
Arst3g05326 512 PANTHER TRANSLATION FACTOR 79 511 - -
Arst3g05326 512 PRINTS GTP-binding elongation factor signature 185 196 IPR000795 GO:0003924|GO:0005525
Arst3g05326 512 PRINTS GTP-binding elongation factor signature 229 238 IPR000795 GO:0003924|GO:0005525
Arst3g05326 512 PRINTS GTP-binding elongation factor signature 169 179 IPR000795 GO:0003924|GO:0005525
Arst3g05326 512 PRINTS GTP-binding elongation factor signature 90 103 IPR000795 GO:0003924|GO:0005525
Arst3g05326 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 321 IPR027417 -
Arst3g05326 512 CDD eRF3_C_III 404 510 - -
Arst3g05326 512 FunFam Putative translation elongation/initiation factor family protein 404 512 - -
Arst3g05326 512 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 86 311 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05326 Arst-Chr3 128252496 128261305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05326 88 510 Eukaryotic Initiation Factors Gene Family AT5G10630 38.372 3.79e-95 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05326 K03267 - gmx:100784412 848.966