Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05325 ATGGATATCGAGGAAGACATCCGTTCTTTGCAGCTTGACTCAGCAGCAGAAGACAATAATGGGGTGGTAATTCCAGATGATGTAAAGCCAGAAGAAGTTGATAAATCTGAAAAGATTGAAGAAATTGAGAAATCTAATGAGATGGATGAAGTGAGAAATAGAGAAATTCATCCTGTACAAGATCAAGAAGATGAGCTTGACAACCGAAAAAGGCACTTGAATGTTGTATTCATTGGCCATGTTGATGCTGGTAAGTCAACAACCGGAGGCCAGATACTTTTCCTCAGTGGTCAGGTTGATGAAAGGACTATACAGAAATATGAGAAAGAAGCTAAAGATAAAAGTCGAGAAAGCTGGTATATGGCTTATATAATGGACACAAATGAGGAGGAGAGAGTGAAGGGAAAAACAGTTGAAGTTGGAAGAGCTCATTTTGAGACAGAGTCAACACGGTTTACAATTTTGGATGCACCTGGTCATAAAAGCTATGTTCCTAACATGATTAGTGGTGCATCTCAAGCTGATGTTGGAGTGTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGACTAAGCTGCTTGTTGTTGTAAATAAAATGGATGATCCAACTGTGAATTGGGCAAAAGAAAGGTATGATGAGATTGAGTCAAAGATGATTCCATTTTTGAGACAATCAGGATACAATGTGAAGAAAGATGTCATGTTTTTGCCAATATCTGGTCTGATTGGCACCAACTTGCAAACAAGAGTGGATAAAAGCATTTGCTCATGGTGGGATGGCCCTTGCTTATTTGAAGCGCTTGATGCTGTTGAAGTTCCTCTACGAGACCCCAATGGTCCTTTCAGGATGCCTATACTTGATAAATTCAAAGACATGGGAACTGTCGTTATGGGGAAAGTGGAATTTGGCAGTGTCCGTGAGGGAGATTCCTTGTTGGTCATGCCAAATAAGGATCAAGTTAAAGTTGTTGCTGTATTCATTGATGAAAATCGGGTTAGGCGTGCAGGACCTGGTGAAAATTTACGGATTAGGTTATCAGGTGTTGAAGAGGAGGATATATTATCTGGGTTTGTTCTGTCTAGTGTTGCAAATCCAGTGCCAACTGTTACTGAGTTTGTTGCTCAGCTGCAAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTATTGCATATACACTCTGTTGTTGAAGAATGTGAAATTGTTGAGCTGTTACAGCAAATAGATCCAAAGACAAAGAAACCAATGAAAAAGAAAGTGCTATTTGTGAAGAATGGTGCTGTTGTTGTGTGCCGTGTTCAGGTTAGTAACACGATATGTGTTGAGAAGTTTTCTGATTTTCCGCAACTAGGGAGATTCACTCTTCGCAGTGAAGGAAAAACTGTTGCGGTTGGGAAAGTCACTGGTGTGTGA 1491 0.4044 MDIEEDIRSLQLDSAAEDNNGVVIPDDVKPEEVDKSEKIEEIEKSNEMDEVRNREIHPVQDQEDELDNRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADVGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWAKERYDEIESKMIPFLRQSGYNVKKDVMFLPISGLIGTNLQTRVDKSICSWWDGPCLFEALDAVEVPLRDPNGPFRMPILDKFKDMGTVVMGKVEFGSVREGDSLLVMPNKDQVKVVAVFIDENRVRRAGPGENLRIRLSGVEEEDILSGFVLSSVANPVPTVTEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQVSNTICVEKFSDFPQLGRFTLRSEGKTVAVGKVTGV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05325 496 CDD EF1_alpha 74 294 - -
Arst3g05325 496 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 49 294 - -
Arst3g05325 496 Gene3D - 50 294 IPR027417 -
Arst3g05325 496 Gene3D Translation factors 299 384 - -
Arst3g05325 496 PRINTS GTP-binding elongation factor signature 169 180 IPR000795 GO:0003924|GO:0005525
Arst3g05325 496 PRINTS GTP-binding elongation factor signature 213 222 IPR000795 GO:0003924|GO:0005525
Arst3g05325 496 PRINTS GTP-binding elongation factor signature 74 87 IPR000795 GO:0003924|GO:0005525
Arst3g05325 496 PRINTS GTP-binding elongation factor signature 153 163 IPR000795 GO:0003924|GO:0005525
Arst3g05325 496 Pfam Elongation factor Tu C-terminal domain 387 496 IPR004160 -
Arst3g05325 496 SUPERFAMILY Translation proteins 293 386 IPR009000 -
Arst3g05325 496 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 126 141 IPR031157 -
Arst3g05325 496 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 390 495 IPR009001 -
Arst3g05325 496 CDD eRF3_II 301 382 - -
Arst3g05325 496 PANTHER TRANSLATION FACTOR 62 495 - -
Arst3g05325 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 305 IPR027417 -
Arst3g05325 496 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 298 384 - -
Arst3g05325 496 FunFam Putative translation elongation/initiation factor family protein 388 496 - -
Arst3g05325 496 MobiDBLite consensus disorder prediction 24 50 - -
Arst3g05325 496 MobiDBLite consensus disorder prediction 1 50 - -
Arst3g05325 496 CDD eRF3_C_III 388 494 - -
Arst3g05325 496 Gene3D Translation factors 389 496 - -
Arst3g05325 496 Pfam Elongation factor Tu GTP binding domain 70 276 IPR000795 GO:0003924|GO:0005525
Arst3g05325 496 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 70 295 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05325 Arst-Chr3 128252496 128261305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05325 66 496 Eukaryotic Initiation Factors Gene Family AT5G60390 37.097 3.20e-95 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05325 K03267 - gmx:100784412 819.305