Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05323 ATGGATATCGAGGAAGACATCCGTTCTTTGCAGCTTGACTCAGCAGAAGACAATAATGGGGTGGTAATTCCAGATGATGTAAAGCCAGAAGAAGTTGATAAATCTGAAAAGATTGAAGAAATTGAGAAATCTAATGAGATGGATGAAGTGAGAAATAGAGAAATTCATCCTGTACAAGATCAAGAAGATGAGCTTGACAACCGAAAAAGGCACTTGAATGTTGTATTCATTGGCCATGTTGATGCTGGTAAGTCAACAACCGGAGGCCAGATACTTTTCCTCAGTGGTCAGGTTGATGAAAGGACTATACAGAAATATGAGAAAGAAGCTAAAGATAAAAGTCGAGAAAGCTGGTATATGGCTTATATAATGGACACAAATGAGGAGGAGAGAGTGAAGGGAAAAACAGTTGAAGTTGGAAGAGCTCATTTTGAGACAGAGTCAACACGGTTTACAATTTTGGATGCACCTGGTCATAAAAGCTATGTTCCTAACATGATTAGTGGTGCATCTCAAGCTGATGTTGGAGTGTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGACTAAGCTGCTTGTTGTTGTAAATAAAATGGATGATCCAACTGTGAATTGGGCAAAAGAAAGGTATGATGAGATTGAGTCAAAGATGATTCCATTTTTGAGACAATCAGGATACAATGTGAAGAAAGATGTCATGTTTTTGCCAATATCTGGTCTGATTGGCACCAACTTGCAAACAAGAGTGGATAAAAGCATTTGCTCATGGTGGGATGGCCCTTGCTTATTTGAAGCGCTTGATGCTGTTGAAGTTCCTCTACGAGACCCCAATGGTCCTTTCAGGATGCCTATACTTGATAAATTCAAAGACATGGGAACTGTCGTTATGGGGAAAGTGGAATTTGGCAGTGTCCGTGAGGGAGATTCCTTGTTGGTCATGCCAAATAAGGATCAAGTTAAAGTTGTTGCTGTATTCATTGATGAAAATCGGGTTAGGCGTGCAGGACCTGGTGAAAATTTACGGATTAGGTTATCAGGTGTTGAAGAGGAGGATATATTATCTGGGTTTGTTCTGTCTAGTGTTGCAAATCCAGTGCCAACTGTTACTGAGTTTGTTGCTCAGCTGCAAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTATTGCATATACACTCTGTTGTTGAAGAATGTGAAATTGTTGAGCTGTTACAGCAAATAGATCCAAAGACAAAGAAACCAATGAAAAAGAAAGTGCTATTTGTGAAGAATGGTGCTGTTGTTGTGTGCCGTGTTCAGGTTAGTAACACGATATGTGTTGAGAAGTTTTCTGATTTTCCGCAACTAGGGAGATTCACTCTTCGCAGTGAAGGAAAAACTGTTGCGGTTGGGAAAGTCACTGGTGTGTGA 1488 0.4039 MDIEEDIRSLQLDSAEDNNGVVIPDDVKPEEVDKSEKIEEIEKSNEMDEVRNREIHPVQDQEDELDNRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADVGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWAKERYDEIESKMIPFLRQSGYNVKKDVMFLPISGLIGTNLQTRVDKSICSWWDGPCLFEALDAVEVPLRDPNGPFRMPILDKFKDMGTVVMGKVEFGSVREGDSLLVMPNKDQVKVVAVFIDENRVRRAGPGENLRIRLSGVEEEDILSGFVLSSVANPVPTVTEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQVSNTICVEKFSDFPQLGRFTLRSEGKTVAVGKVTGV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05323 495 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 389 494 IPR009001 -
Arst3g05323 495 CDD eRF3_C_III 387 493 - -
Arst3g05323 495 Pfam Elongation factor Tu C-terminal domain 386 495 IPR004160 -
Arst3g05323 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 304 IPR027417 -
Arst3g05323 495 Gene3D Translation factors 298 383 - -
Arst3g05323 495 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 297 383 - -
Arst3g05323 495 MobiDBLite consensus disorder prediction 1 49 - -
Arst3g05323 495 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 69 294 IPR000795 GO:0003924|GO:0005525
Arst3g05323 495 Gene3D - 49 293 IPR027417 -
Arst3g05323 495 CDD EF1_alpha 73 293 - -
Arst3g05323 495 CDD eRF3_II 300 381 - -
Arst3g05323 495 Pfam Elongation factor Tu GTP binding domain 69 275 IPR000795 GO:0003924|GO:0005525
Arst3g05323 495 Gene3D Translation factors 388 495 - -
Arst3g05323 495 MobiDBLite consensus disorder prediction 23 49 - -
Arst3g05323 495 PRINTS GTP-binding elongation factor signature 152 162 IPR000795 GO:0003924|GO:0005525
Arst3g05323 495 PRINTS GTP-binding elongation factor signature 212 221 IPR000795 GO:0003924|GO:0005525
Arst3g05323 495 PRINTS GTP-binding elongation factor signature 73 86 IPR000795 GO:0003924|GO:0005525
Arst3g05323 495 PRINTS GTP-binding elongation factor signature 168 179 IPR000795 GO:0003924|GO:0005525
Arst3g05323 495 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 125 140 IPR031157 -
Arst3g05323 495 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 48 293 - -
Arst3g05323 495 SUPERFAMILY Translation proteins 292 385 IPR009000 -
Arst3g05323 495 PANTHER TRANSLATION FACTOR 61 494 - -
Arst3g05323 495 FunFam Putative translation elongation/initiation factor family protein 387 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05323 Arst-Chr3 128252496 128261305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05323 65 495 Eukaryotic Initiation Factors Gene Family AT5G60390 37.097 2.85e-95 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05323 K03267 - gmx:100784412 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00148 10 1389880 1392269 Arst3g05323 3 128252496 128261305 PCT