Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05318 ATGGACACGGACCTTGAAGCTGTCATACGAGATCGAAATATTTTTCTTTCTCCAGCTGATACAAAATCCTACCTCCAAATGACGCTAAAGGGTCTTGCTTTTTGCCACAAGAAATGGGTTTTGCATAGGGATATGAAGCCAAATAATTTGTTGATAGGATCTCATGGACAGCTGAAACTTGCAGATTTTGGTTTGGCACGCATATTTGGAAGTCCGGATAGAAGGTTCACACATCAGGTGTTTGCTCGGTGGTACAGAGCACCTGAGCTATTATTTGGTGCAAAGCAATATGGTTCAGGGGTAGATGTTTGGGCTGCAGCTTGTATTTTTGCTGAACTTCTTCTCCGCCGACCCTTTTTGCAGGGTTCAAGTGATATCGATCAGTTAGGCAAGATTTTTGCAGCATTTGGCACTCCGACACCTGCTCAGTGGCCTGATATGGTATATCTTCCAGATTACGTTGAATATCAATGTGTTCCTGCCCCCCCTTTGCGTACTTTGTTTCCAACAGCAAGTGACGATGCTTTAGATCTATTGTCAAAGATGTTTACATATGATCCAAAAGCTAGAATTTCAGTGCAGCAGGCACTAGAGCACAGATACTTTTCTTCTGCACCTCTGCCCACAGATCCAGAGAAGCTCCCTAGGCCAGCCCCAAAGAAGGAATCTAGGGCTTCTGATTTTGATTTGCAGCAGGGTCCTACTGTGTTATCACCTCCAAGAAAGTCTAGGAGAGTGATGCCTGGGCGTGATGGGTTCGAAGGAAATTCTTTTCAAGGAGTGAAGGATGATGATGGAAATTTCGGTGATTTCAGACAGACAGTTGGTGATAATACAGGCAAGAACCAACCAGTTCCAATGTCAGTAGATTTTTCTATCTTTGCATTAAAATCTCCAGATAGACCTACAATTAACAGGTAA 921 0.4343 MDTDLEAVIRDRNIFLSPADTKSYLQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPAQWPDMVYLPDYVEYQCVPAPPLRTLFPTASDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLPTDPEKLPRPAPKKESRASDFDLQQGPTVLSPPRKSRRVMPGRDGFEGNSFQGVKDDDGNFGDFRQTVGDNTGKNQPVPMSVDFSIFALKSPDRPTINR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05318 306 FunFam Putative cyclin-dependent kinase 7 3 218 - -
Arst3g05318 306 Gene3D Transferase(Phosphotransferase) domain 1 3 218 - -
Arst3g05318 306 PANTHER CELL DIVISION PROTEIN KINASE 1 208 - -
Arst3g05318 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 40 52 IPR008271 GO:0004672|GO:0006468
Arst3g05318 306 SMART serkin_6 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05318 306 MobiDBLite consensus disorder prediction 202 286 - -
Arst3g05318 306 SUPERFAMILY Protein kinase-like (PK-like) 2 209 IPR011009 -
Arst3g05318 306 MobiDBLite consensus disorder prediction 272 286 - -
Arst3g05318 306 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05318 306 Pfam Protein kinase domain 3 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05318 Arst-Chr3 128238106 128240985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05318 1 305 Core Cell Cycle Gene Families AT1G18040 70.164 1.75e-154 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Arst3g05318 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05318 K02202 - gmx:100786357 544.273