Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05295 ATGGATCGGGATTATGATATGAGGCAGCATTCCCTCCTGAAAGTTCCCGGGGCCAAGCTCCGCCTGATGTGCAGCTATGGAGGCAATATCATGCCACGCCCCCGCCCCCACAACAACCACGACTCTCTCTACTACGTGGGCGGCGACACCCGCATGGTGGCTGTGGAGCGTAACACCTCCCTGAAGGACCTCTGTGCTGGCCTCTCCAACACCCTTCTCCATGGACGTCCCTTCACCCTCAAGTACCAGCTCCCCGAGGAGCAACTTGACAACCTCATCACCGTGGCCACCGATGACGACCTCCAGAACATGATCCAAGAGTATGACCGCTTGGCTTCTTTCTCTCCTCCTCTGCGTCTCAGGGTCTTCCTCTTTGTCTCGAAACTAGACACGGCGGTTTCCATGGGTGCACTCCTGGACGATGCCAAGTCCGAGACGTGGTTCGTGGACGCTCTCAACAACTCGGGGATGATGAATAATATATCTCGTGTTGTTTCTGATTCTGCTGCTGTTGATGAATGCCTCCTCAGCCTTGCTGATGAAGTCCCAGTCCCACATAAAACGGAGCAGGAAGTTAATAAGCAGCATTTGGGTGATGGCAGCAGCAAGGTGATGGACGAGCATTTTGCACAACTCACGCTTGGTTTGCCTTCTCCTGATTCTGTTGCAAGTGATAGCAGCATTGCATCTGCAGCAAGTTGTTCAATCTCAAAGGGGCAGGGGTTTTATTATCAAGAACAACAAGTGGATCCAAATCAGAATCAGCAGCAGCAATTTGTGTACATCCAACCCCACACTCACAACACTGGACATGGACATGGACATGGACAAGTGACAATGCCATCCTACCACAACACAGTGTATGTAGTGCCAGTTGACATTTCACAAGTGGCAACTAATTACCCAACTATGCTAACTACCGCAACCAATGTACCTGACATGCCTTCAACTCATCCTGCATTTCTTCAAACACCTTCCAATCAATATCAGCAACAACGCTATGTGCCTTTGCCTCATCATCCAATTGCAGTTGCCACAACCAATTATGGGGGTGGACCTAAGCAAGACCAGCAACTAGTATATTACACACAAACGCAAACCCAGCAGCAGCAATCCAGTGCTCCACAACCCCTTCAGTACCAATCCATGATCCCAGCAGCCAAAGAGTTCCCTCTGTGA 1179 0.5055 MDRDYDMRQHSLLKVPGAKLRLMCSYGGNIMPRPRPHNNHDSLYYVGGDTRMVAVERNTSLKDLCAGLSNTLLHGRPFTLKYQLPEEQLDNLITVATDDDLQNMIQEYDRLASFSPPLRLRVFLFVSKLDTAVSMGALLDDAKSETWFVDALNNSGMMNNISRVVSDSAAVDECLLSLADEVPVPHKTEQEVNKQHLGDGSSKVMDEHFAQLTLGLPSPDSVASDSSIASAASCSISKGQGFYYQEQQVDPNQNQQQQFVYIQPHTHNTGHGHGHGQVTMPSYHNTVYVVPVDISQVATNYPTMLTTATNVPDMPSTHPAFLQTPSNQYQQQRYVPLPHHPIAVATTNYGGGPKQDQQLVYYTQTQTQQQQSSAPQPLQYQSMIPAAKEFPL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05295 392 Pfam PB1 domain 43 126 IPR000270 GO:0005515
Arst3g05295 392 Gene3D - 44 126 - -
Arst3g05295 392 PANTHER OS05G0427100 PROTEIN-RELATED 18 361 - -
Arst3g05295 392 SMART PB1_new 38 125 IPR000270 GO:0005515
Arst3g05295 392 SUPERFAMILY CAD & PB1 domains 41 135 - -
Arst3g05295 392 CDD PB1_UP2 23 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05295 Arst-Chr3 128047989 128049720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05295 19 154 MAP Kinase Kinase Kinase AT5G57610 40.146 6.98e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05295 - - ahf:112783394 691.034