Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05290 ATGGGTAAGAAGAAGAAGAGGGTTGCGTCCAAGGTGTGGTGCTATTACTGCGATCGCGAATTCGACGACGAGAAGATCTTGGTGCAGCATCAGAAGGCCAAGCACTTCAAGTGCCATGTATGCCACAAGAAGCTCTCCACCGCCGGCGGTATGGCCATCCACGTCCTCCAGGTCCACAAGGAATCCGTCACCAAGGTGCCGAATGCGAAACCTGGTAGAGAGAGTACAGATATTGAAATATATGGAATGCAAGGGATTCCACCAGATGTCTTGGCTGCTCATTATGGAGAAGAAGATGATGATGTTCCATCAAAGGCAGCAAAGGTGGACATACCATCAACACAGCTTGTAGGTGGAATGGTGCCACCTCCTTTGGGTACAGGATATCCTCCTCGACCAGCGGTACCGCCAATGTATAATCCAGCGGTGCCTGTCCCCCCAAATGCTTGGGCTGTTCCACCTCGACCGGCTCAGCCATGGTATCCCCAACCTCCATCTGTTTCGATTCCACCACCGGCTCCTTACGCACAACAGCCATTATTCCCCGTGCAGAACGTGAGACCGCCACTGCCATCAACTGCTCCTTCTCCACTCCAAACTCAGGTTACTCCTCCTGGGATGCCTTCATCTACACCTTCTGTCCCTGTTTCGCAACCTTTGTTTCCTGTTATTACAACTCAAAGTTCAACATTTTCTCCTGCTCCTCTATCTTCAAGTGCTCCATCCATAAATCCAGTGATATCCTCAAGTGCCCCTGTTGATTCCCATTTGGGTGCCAACTCTGTTGTAAATGCTTATCAGGCAATAGGGATTCCAGGTGGGACAGCAGGTAACTCACATTCCTATGCATCTGGTCCAAATACCGGTGGCCCTTCTATCGGACCTCCCCCGGTAATTGCAAACAAAGCTCCTGCGCCTCAGCCTGCTGCTAATGAAGTCTACTTAGTTTGGGATGATGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTCTGCCAAAATATCAGGTTCATGATGAAACTAGCCAGATGAGCTCAATTGATGCAGCAATAGATAAGAGGATACTTGAAAGCAGGTTGGCTGGTCGCATGGCGTTCTAG 1098 0.4991 MGKKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEDDDVPSKAAKVDIPSTQLVGGMVPPPLGTGYPPRPAVPPMYNPAVPVPPNAWAVPPRPAQPWYPQPPSVSIPPPAPYAQQPLFPVQNVRPPLPSTAPSPLQTQVTPPGMPSSTPSVPVSQPLFPVITTQSSTFSPAPLSSSAPSINPVISSSAPVDSHLGANSVVNAYQAIGIPGGTAGNSHSYASGPNTGGPSIGPPPVIANKAPAPQPAANEVYLVWDDEAMSMEERRMSLPKYQVHDETSQMSSIDAAIDKRILESRLAGRMAF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05290 365 CDD SUF4-like 11 92 - -
Arst3g05290 365 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Arst3g05290 365 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Arst3g05290 365 Gene3D Classic Zinc Finger 2 66 - -
Arst3g05290 365 SMART c2h2final6 12 35 IPR013087 -
Arst3g05290 365 SMART c2h2final6 36 59 IPR013087 -
Arst3g05290 365 MobiDBLite consensus disorder prediction 188 214 - -
Arst3g05290 365 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Arst3g05290 365 PANTHER ZINC FINGER PROTEIN 207 1 365 - -
Arst3g05290 365 MobiDBLite consensus disorder prediction 196 214 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05290 1 365 C2H2 Transcription Factor Family AT1G30970 62.371 2.13e-141 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst3g05290 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05290 - - gmx:100789368 553.903